RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
TRIM3-210ENST00000530724 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
TRIM3-210ENST00000530724 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
TRIM3-210ENST00000530724 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
TRIM3-210ENST00000530724 RGS12O14924 1447 aa14.31□□□□□ -0.12
TRIM3-210ENST00000530724 POGZQ7Z3K3 1410 aa14.31□□□□□ -0.12
TRIM3-210ENST00000530724 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
TRIM3-210ENST00000530724 KIF20BQ96Q89 1820 aa14.3□□□□□ -0.12
TRIM3-210ENST00000530724 TPM3P06753 285 aa14.3□□□□□ -0.12
TRIM3-210ENST00000530724 TSPY26PQ9H489 355 aa14.3□□□□□ -0.12
TRIM3-210ENST00000530724 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
TRIM3-210ENST00000530724 ERC2O15083 957 aa14.29□□□□□ -0.12
TRIM3-210ENST00000530724 KIF20AO95235 890 aa14.29□□□□□ -0.12
TRIM3-210ENST00000530724 PTPRCP08575 1304 aa14.29□□□□□ -0.12
TRIM3-210ENST00000530724 PRPF40AO75400 957 aaKnown RBP14.28□□□□□ -0.12
TRIM3-210ENST00000530724 NCLP19338 710 aaKnown RBP14.28□□□□□ -0.12
TRIM3-210ENST00000530724 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-210ENST00000530724 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
TRIM3-210ENST00000530724 FAM13BQ9NYF5 915 aa14.28□□□□□ -0.12
TRIM3-210ENST00000530724 ARHGEF10O15013 1369 aa14.27□□□□□ -0.12
TRIM3-210ENST00000530724 AOX1Q06278 1338 aa14.27□□□□□ -0.12
TRIM3-210ENST00000530724 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
TRIM3-210ENST00000530724 SDSP20132 328 aa14.27□□□□□ -0.13
TRIM3-210ENST00000530724 SYCP1Q15431 976 aa14.27□□□□□ -0.13
TRIM3-210ENST00000530724 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.13
TRIM3-210ENST00000530724 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-210ENST00000530724 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
TRIM3-210ENST00000530724 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
TRIM3-210ENST00000530724 RIMS2Q9UQ26 1411 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 IL13P35225 146 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
TRIM3-210ENST00000530724 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 POLKQ9UBT6 870 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 USP25Q9UHP3 1055 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 NRKQ7Z2Y5 1582 aa14.25□□□□□ -0.13
TRIM3-210ENST00000530724 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
TRIM3-210ENST00000530724 SYCE3A1L190 88 aa14.24□□□□□ -0.13
TRIM3-210ENST00000530724 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
TRIM3-210ENST00000530724 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
TRIM3-210ENST00000530724 PKP1Q13835 747 aa14.24□□□□□ -0.13
TRIM3-210ENST00000530724 TMEM132EQ6IEE7 984 aa14.24□□□□□ -0.13
TRIM3-210ENST00000530724 TMX3Q96JJ7 454 aa14.24□□□□□ -0.13
TRIM3-210ENST00000530724 GGNBP2Q9H3C7 697 aa14.24□□□□□ -0.13
TRIM3-210ENST00000530724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRIM3-210ENST00000530724 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
TRIM3-210ENST00000530724 HMMRO75330 724 aa14.23□□□□□ -0.13
TRIM3-210ENST00000530724 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
TRIM3-210ENST00000530724 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
TRIM3-210ENST00000530724 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
TRIM3-210ENST00000530724 RPAP1Q9BWH6 1393 aaPredicted RBP14.22□□□□□ -0.13
TRIM3-210ENST00000530724 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
TRIM3-210ENST00000530724 MCCP23508 829 aa14.22□□□□□ -0.13
TRIM3-210ENST00000530724 TAF3Q5VWG9 929 aa14.22□□□□□ -0.13
TRIM3-210ENST00000530724 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
TRIM3-210ENST00000530724 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
TRIM3-210ENST00000530724 CTIFO43310 598 aaKnown RBP14.21□□□□□ -0.13
TRIM3-210ENST00000530724 NOLC1Q14978 699 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRIM3-210ENST00000530724 CCDC183Q5T5S1 534 aa14.21□□□□□ -0.13
TRIM3-210ENST00000530724 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
TRIM3-210ENST00000530724 ANKRD7Q92527 254 aa14.21□□□□□ -0.13
TRIM3-210ENST00000530724 DIAPH3Q9NSV4 1193 aa14.21□□□□□ -0.13
TRIM3-210ENST00000530724 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.13
TRIM3-210ENST00000530724 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
TRIM3-210ENST00000530724 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
TRIM3-210ENST00000530724 CHL1O00533 1208 aa14.2□□□□□ -0.14
TRIM3-210ENST00000530724 FAM193AP78312 1265 aa14.2□□□□□ -0.14
TRIM3-210ENST00000530724 FEZ1Q99689 392 aa14.2□□□□□ -0.14
TRIM3-210ENST00000530724 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
TRIM3-210ENST00000530724 C8orf58Q8NAV2 365 aa14.19□□□□□ -0.14
TRIM3-210ENST00000530724 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
TRIM3-210ENST00000530724 FUCA2Q9BTY2 467 aa14.19□□□□□ -0.14
TRIM3-210ENST00000530724 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
TRIM3-210ENST00000530724 NSFL1CQ9UNZ2 370 aaKnown RBP14.19□□□□□ -0.14
TRIM3-210ENST00000530724 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
TRIM3-210ENST00000530724 NEO1Q92859 1461 aa14.18□□□□□ -0.14
TRIM3-210ENST00000530724 MX1P20591 662 aa14.18□□□□□ -0.14
TRIM3-210ENST00000530724 PDE1AP54750 535 aa14.18□□□□□ -0.14
TRIM3-210ENST00000530724 SRPK2P78362 688 aaKnown RBP14.18□□□□□ -0.14
TRIM3-210ENST00000530724 PHACTR3Q96KR7 559 aa14.18□□□□□ -0.14
TRIM3-210ENST00000530724 KDM4AO75164 1064 aa14.17□□□□□ -0.14
TRIM3-210ENST00000530724 UBE2HP62256 183 aa14.17□□□□□ -0.14
TRIM3-210ENST00000530724 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
TRIM3-210ENST00000530724 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
TRIM3-210ENST00000530724 ALKQ9UM73 1620 aa14.16□□□□□ -0.14
TRIM3-210ENST00000530724 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
TRIM3-210ENST00000530724 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
TRIM3-210ENST00000530724 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
TRIM3-210ENST00000530724 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
TRIM3-210ENST00000530724 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
TRIM3-210ENST00000530724 NEK4P51957 841 aa14.15□□□□□ -0.14
TRIM3-210ENST00000530724 CREBRFQ8IUR6 639 aa14.15□□□□□ -0.14
TRIM3-210ENST00000530724 ATP6V1DQ9Y5K8 247 aa14.15□□□□□ -0.14
TRIM3-210ENST00000530724 C16orf71Q8IYS4 520 aaPredicted RBP14.14□□□□□ -0.15
TRIM3-210ENST00000530724 MSH6P52701 1360 aa14.13□□□□□ -0.15
TRIM3-210ENST00000530724 ADCY5O95622 1261 aa14.13□□□□□ -0.15
TRIM3-210ENST00000530724 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
TRIM3-210ENST00000530724 CHMLP26374 656 aa14.13□□□□□ -0.15
TRIM3-210ENST00000530724 GABPB1Q06547 395 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms