RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-206ENST00000530277 APPP05067 770 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 MX1P20591 662 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
SCN3B-206ENST00000530277 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
SCN3B-206ENST00000530277 TCEANC2Q96MN5 208 aa14.95□□□□□ -0.02
SCN3B-206ENST00000530277 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
SCN3B-206ENST00000530277 AACSQ86V21 672 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 CREBRFQ8IUR6 639 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 CCDC8Q9H0W5 538 aaPredicted RBP14.94□□□□□ -0.02
SCN3B-206ENST00000530277 DDX58O95786 925 aaKnown RBP14.94□□□□□ -0.02
SCN3B-206ENST00000530277 SF3A1Q15459 793 aaKnown RBP14.94□□□□□ -0.02
SCN3B-206ENST00000530277 CHAMP1Q96JM3 812 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 ATP10AO60312 1499 aa14.94□□□□□ -0.02
SCN3B-206ENST00000530277 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
SCN3B-206ENST00000530277 CNTROBQ8N137 903 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 TTC37Q6PGP7 1564 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 PI4KAP2A4QPH2 592 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 PI4KAP1Q8N8J0 262 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
SCN3B-206ENST00000530277 ISY1Q9ULR0 285 aaKnown RBP14.93□□□□□ -0.02
SCN3B-206ENST00000530277 PPIP5K1Q6PFW1 1433 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 KAT6BQ8WYB5 2073 aa14.93□□□□□ -0.02
SCN3B-206ENST00000530277 XRCC6P12956 609 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 CHAF1AQ13111 956 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 ZGPATQ8N5A5 531 aaKnown RBP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 BOLA2Q9H3K6 86 aa14.92□□□□□ -0.02
SCN3B-206ENST00000530277 SMC5Q8IY18 1101 aa14.92□□□□□ -0.02
SCN3B-206ENST00000530277 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 SPC24Q8NBT2 197 aa14.92□□□□□ -0.02
SCN3B-206ENST00000530277 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
SCN3B-206ENST00000530277 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 NPATQ14207 1427 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 WASHC4Q2M389 1173 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 ZNF592Q92610 1267 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 ATF3P18847 181 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
SCN3B-206ENST00000530277 ESPNB1AK53 854 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 ABCA8O94911 1581 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 TTC22Q5TAA0 569 aa14.9□□□□□ -0.02
SCN3B-206ENST00000530277 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
SCN3B-206ENST00000530277 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
SCN3B-206ENST00000530277 CCDC83Q8IWF9 413 aa14.89□□□□□ -0.03
SCN3B-206ENST00000530277 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SCN3B-206ENST00000530277 PHAXQ9H814 394 aaKnown RBP14.89□□□□□ -0.03
SCN3B-206ENST00000530277 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
SCN3B-206ENST00000530277 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 ERVK-7P63135 1459 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 PHF14O94880 888 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 EYA1Q99502 592 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 ATP5J2-PTCD1G3V325 749 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 MAP3K19Q56UN5 1328 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 BAG4O95429 457 aaKnown RBP14.88□□□□□ -0.03
SCN3B-206ENST00000530277 CPA1P15085 419 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 ZMYND15Q9H091 742 aa14.88□□□□□ -0.03
SCN3B-206ENST00000530277 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
SCN3B-206ENST00000530277 GTF2E1P29083 439 aaPredicted RBP14.87□□□□□ -0.03
SCN3B-206ENST00000530277 PLEKHM2Q8IWE5 1019 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 TRMT2AQ8IZ69 625 aaKnown RBP14.87□□□□□ -0.03
SCN3B-206ENST00000530277 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 PHF8Q9UPP1 1060 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 YTHDC2Q9H6S0 1430 aaKnown RBP14.87□□□□□ -0.03
SCN3B-206ENST00000530277 NSD2O96028 1365 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 ATP6V1DQ9Y5K8 247 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 IL13P35225 146 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 HSP90AB4PQ58FF6 505 aa14.87□□□□□ -0.03
SCN3B-206ENST00000530277 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
SCN3B-206ENST00000530277 ADGBQ8N7X0 1667 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 ATP2B1P20020 1258 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 BECN2A8MW95 431 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 CEP85Q6P2H3 762 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 KDM5DQ9BY66 1539 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 IL16Q14005 1332 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 PDE1AP54750 535 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 CAMK4Q16566 473 aa14.86□□□□□ -0.03
SCN3B-206ENST00000530277 ANKRD44Q8N8A2 993 aa14.85□□□□□ -0.03
SCN3B-206ENST00000530277 CABLES1Q8TDN4 633 aa14.85□□□□□ -0.03
SCN3B-206ENST00000530277 RNF20Q5VTR2 975 aa14.85□□□□□ -0.03
SCN3B-206ENST00000530277 YEATS2Q9ULM3 1422 aa14.85□□□□□ -0.03
SCN3B-206ENST00000530277 RIMS2Q9UQ26 1411 aa14.85□□□□□ -0.03
SCN3B-206ENST00000530277 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCN3B-206ENST00000530277 CPLX1O14810 134 aa14.84□□□□□ -0.03
SCN3B-206ENST00000530277 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
SCN3B-206ENST00000530277 DNAAF4Q8WXU2 420 aa14.84□□□□□ -0.03
SCN3B-206ENST00000530277 KCNA6P17658 529 aa14.83□□□□□ -0.03
SCN3B-206ENST00000530277 CWF19L2Q2TBE0 894 aaKnown RBP14.83□□□□□ -0.03
SCN3B-206ENST00000530277 MYD88Q99836 296 aa14.83□□□□□ -0.03
SCN3B-206ENST00000530277 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms