RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 BRD1O95696 1058 aa7.09□□□□□ -1.27
SVIP-203ENST00000529848 CLDN10P78369 228 aa7.09□□□□□ -1.27
SVIP-203ENST00000529848 SPRYD7Q5W111 196 aa7.09□□□□□ -1.27
SVIP-203ENST00000529848 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
SVIP-203ENST00000529848 SIAH2O43255 324 aa7.08□□□□□ -1.28
SVIP-203ENST00000529848 ADH1CP00326 375 aa7.08□□□□□ -1.28
SVIP-203ENST00000529848 DPYDQ12882 1025 aa7.08□□□□□ -1.28
SVIP-203ENST00000529848 ZNF697Q5TEC3 545 aa7.08□□□□□ -1.28
SVIP-203ENST00000529848 MRGPRX2Q96LB1 330 aa7.08□□□□□ -1.28
SVIP-203ENST00000529848 KCNA1Q09470 495 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 NR5A1Q13285 461 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 CC2D2BQ6DHV5 1058 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 ZNF598Q86UK7 904 aaKnown RBP7.07□□□□□ -1.28
SVIP-203ENST00000529848 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 SIX5Q8N196 739 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 PRKD2Q9BZL6 878 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 KIAA1024Q9UPX6 916 aa7.07□□□□□ -1.28
SVIP-203ENST00000529848 ZBTB7BO15156 539 aaPredicted RBP7.06□□□□□ -1.28
SVIP-203ENST00000529848 GRM5P41594 1212 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 SEC13P55735 322 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 FOXC1Q12948 553 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 TPCN2Q8NHX9 752 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 TMPRSS4Q9NRS4 437 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 PCDHGA11Q9Y5H2 935 aa7.06□□□□□ -1.28
SVIP-203ENST00000529848 SCTRP47872 440 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 CYLDQ9NQC7 956 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 WASF2Q9Y6W5 498 aa7.05□□□□□ -1.28
SVIP-203ENST00000529848 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
SVIP-203ENST00000529848 ALDH1A1P00352 501 aa7.04□□□□□ -1.28
SVIP-203ENST00000529848 MYT1Q01538 1121 aa7.04□□□□□ -1.28
SVIP-203ENST00000529848 PPP1R26Q5T8A7 1209 aaPredicted RBP7.04□□□□□ -1.28
SVIP-203ENST00000529848 ZNF784Q8NCA9 323 aaPredicted RBP7.04□□□□□ -1.28
SVIP-203ENST00000529848 CLP1Q92989 425 aaKnown RBP7.04□□□□□ -1.28
SVIP-203ENST00000529848 SFI1A8K8P3 1242 aa7.03□□□□□ -1.28
SVIP-203ENST00000529848 RGS20O76081 388 aa7.03□□□□□ -1.28
SVIP-203ENST00000529848 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
SVIP-203ENST00000529848 DKK1O94907 266 aa7.02□□□□□ -1.29
SVIP-203ENST00000529848 NNTQ13423 1086 aa7.02□□□□□ -1.29
SVIP-203ENST00000529848 CYP2U1Q7Z449 544 aa7.02□□□□□ -1.29
SVIP-203ENST00000529848 SNIP1Q8TAD8 396 aaKnown RBP7.02□□□□□ -1.29
SVIP-203ENST00000529848 HINFPQ9BQA5 517 aa7.02□□□□□ -1.29
SVIP-203ENST00000529848 OSBPL3Q9H4L5 887 aa7.02□□□□□ -1.29
SVIP-203ENST00000529848 TTC24A2A3L6 582 aaPredicted RBP7.01□□□□□ -1.29
SVIP-203ENST00000529848 NR3C2P08235 984 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 ATP2B4P23634 1241 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 FAM69CQ0P6D2 419 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 TRIM67Q6ZTA4 783 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 CYP4X1Q8N118 509 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
SVIP-203ENST00000529848 GZF1Q9H116 711 aaPredicted RBP7.01□□□□□ -1.29
SVIP-203ENST00000529848 PKD2L1Q9P0L9 805 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
SVIP-203ENST00000529848 M0R2N6 131 aa7□□□□□ -1.29
SVIP-203ENST00000529848 GDF10P55107 478 aa7□□□□□ -1.29
SVIP-203ENST00000529848 ZNF358Q9NW07 568 aa7□□□□□ -1.29
SVIP-203ENST00000529848 BACH1O14867 736 aa6.99□□□□□ -1.29
SVIP-203ENST00000529848 PRMT3O60678 531 aa6.99□□□□□ -1.29
SVIP-203ENST00000529848 LILRA1O75019 489 aa6.99□□□□□ -1.29
SVIP-203ENST00000529848 GNRH1P01148 92 aa6.99□□□□□ -1.29
SVIP-203ENST00000529848 SSFA2P28290 1259 aa6.99□□□□□ -1.29
SVIP-203ENST00000529848 CCER1Q8TC90 406 aaPredicted RBP6.99□□□□□ -1.29
SVIP-203ENST00000529848 CCDC9Q9Y3X0 531 aaKnown RBP6.99□□□□□ -1.29
SVIP-203ENST00000529848 TMEM229AB2RXF0 380 aa6.98□□□□□ -1.29
SVIP-203ENST00000529848 TNFRSF10AO00220 468 aa6.98□□□□□ -1.29
SVIP-203ENST00000529848 GDF9O60383 454 aa6.98□□□□□ -1.29
SVIP-203ENST00000529848 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
SVIP-203ENST00000529848 TSEN2Q8NCE0 465 aaKnown RBP6.98□□□□□ -1.29
SVIP-203ENST00000529848 SLAIN2Q9P270 581 aa6.98□□□□□ -1.29
SVIP-203ENST00000529848 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
SVIP-203ENST00000529848 INHAP05111 366 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
SVIP-203ENST00000529848 ADD1P35611 737 aaKnown RBP6.97□□□□□ -1.29
SVIP-203ENST00000529848 SCNN1DP51172 638 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 PRIMPOLQ96LW4 560 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 ETNK1Q9HBU6 452 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
SVIP-203ENST00000529848 J3QL48 77 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 LGR5O75473 907 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 ZIC2O95409 532 aaPredicted RBP6.96□□□□□ -1.3
SVIP-203ENST00000529848 STAU1O95793 577 aaKnown RBP6.96□□□□□ -1.3
SVIP-203ENST00000529848 ADH1AP07327 375 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 WDR4P57081 412 aaKnown RBP6.96□□□□□ -1.3
SVIP-203ENST00000529848 PHLDB3Q6NSJ2 640 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 RAB6BQ9NRW1 208 aa6.96□□□□□ -1.3
SVIP-203ENST00000529848 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
SVIP-203ENST00000529848 GNEQ9Y223 722 aaKnown RBP6.96□□□□□ -1.3
SVIP-203ENST00000529848 TXNDC2Q86VQ3 553 aa6.95□□□□□ -1.3
SVIP-203ENST00000529848 C1orf216Q8TAB5 229 aa6.95□□□□□ -1.3
SVIP-203ENST00000529848 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
SVIP-203ENST00000529848 TOR4AQ9NXH8 423 aa6.95□□□□□ -1.3
SVIP-203ENST00000529848 PRR20EP86478 221 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 PRR20CP86479 221 aa6.94□□□□□ -1.3
SVIP-203ENST00000529848 PRR20DP86480 221 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms