RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NSD2O96028 1365 aa16.69■□□□□ 0.26
AMBRA1-207ENST00000529553 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
AMBRA1-207ENST00000529553 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
AMBRA1-207ENST00000529553 USP47Q96K76 1375 aa16.68■□□□□ 0.26
AMBRA1-207ENST00000529553 TOMM70O94826 608 aa16.68■□□□□ 0.26
AMBRA1-207ENST00000529553 NME9Q86XW9 330 aa16.68■□□□□ 0.26
AMBRA1-207ENST00000529553 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
AMBRA1-207ENST00000529553 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
AMBRA1-207ENST00000529553 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
AMBRA1-207ENST00000529553 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
AMBRA1-207ENST00000529553 LY75O60449 1722 aa16.64■□□□□ 0.25
AMBRA1-207ENST00000529553 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
AMBRA1-207ENST00000529553 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
AMBRA1-207ENST00000529553 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
AMBRA1-207ENST00000529553 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-207ENST00000529553 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
AMBRA1-207ENST00000529553 L3MBTL2Q969R5 705 aa16.6■□□□□ 0.25
AMBRA1-207ENST00000529553 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
AMBRA1-207ENST00000529553 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
AMBRA1-207ENST00000529553 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
AMBRA1-207ENST00000529553 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
AMBRA1-207ENST00000529553 HOXC9P31274 260 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 RBM46Q8TBY0 533 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 KLRG1Q96E93 195 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 AK7Q96M32 723 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 MON2Q7Z3U7 1717 aa16.58■□□□□ 0.24
AMBRA1-207ENST00000529553 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
AMBRA1-207ENST00000529553 SSFA2P28290 1259 aa16.57■□□□□ 0.24
AMBRA1-207ENST00000529553 AMPHP49418 695 aa16.57■□□□□ 0.24
AMBRA1-207ENST00000529553 PRELPP51888 382 aa16.57■□□□□ 0.24
AMBRA1-207ENST00000529553 LTN1O94822 1766 aa16.56■□□□□ 0.24
AMBRA1-207ENST00000529553 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
AMBRA1-207ENST00000529553 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
AMBRA1-207ENST00000529553 TGFB2P61812 414 aa16.56■□□□□ 0.24
AMBRA1-207ENST00000529553 FSTL1Q12841 308 aa16.56■□□□□ 0.24
AMBRA1-207ENST00000529553 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
AMBRA1-207ENST00000529553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
AMBRA1-207ENST00000529553 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
AMBRA1-207ENST00000529553 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
AMBRA1-207ENST00000529553 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
AMBRA1-207ENST00000529553 COG3Q96JB2 828 aa16.54■□□□□ 0.24
AMBRA1-207ENST00000529553 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
AMBRA1-207ENST00000529553 MEGF6O75095 1541 aa16.54■□□□□ 0.24
AMBRA1-207ENST00000529553 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
AMBRA1-207ENST00000529553 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
AMBRA1-207ENST00000529553 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
AMBRA1-207ENST00000529553 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
AMBRA1-207ENST00000529553 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
AMBRA1-207ENST00000529553 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
AMBRA1-207ENST00000529553 PHF14O94880 888 aa16.51■□□□□ 0.23
AMBRA1-207ENST00000529553 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
AMBRA1-207ENST00000529553 C5P01031 1676 aa16.5■□□□□ 0.23
AMBRA1-207ENST00000529553 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
AMBRA1-207ENST00000529553 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
AMBRA1-207ENST00000529553 CAPN15O75808 1086 aa16.49■□□□□ 0.23
AMBRA1-207ENST00000529553 BCS1LQ9Y276 419 aa16.49■□□□□ 0.23
AMBRA1-207ENST00000529553 MMP10P09238 476 aa16.48■□□□□ 0.23
AMBRA1-207ENST00000529553 PIGBQ92521 554 aa16.48■□□□□ 0.23
AMBRA1-207ENST00000529553 CYP27B1O15528 508 aa16.47■□□□□ 0.23
AMBRA1-207ENST00000529553 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
AMBRA1-207ENST00000529553 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
AMBRA1-207ENST00000529553 C4BP0C0L5 1744 aa16.47■□□□□ 0.23
AMBRA1-207ENST00000529553 PXDNLA1KZ92 1463 aa16.47■□□□□ 0.23
AMBRA1-207ENST00000529553 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 FBLN1P23142 703 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 SIK1P57059 783 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 HTRA3P83110 453 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
AMBRA1-207ENST00000529553 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
AMBRA1-207ENST00000529553 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
AMBRA1-207ENST00000529553 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
AMBRA1-207ENST00000529553 LINC00116Q8NCU8 138 aa16.45■□□□□ 0.22
AMBRA1-207ENST00000529553 PLEKHG2Q9H7P9 1386 aa16.45■□□□□ 0.22
AMBRA1-207ENST00000529553 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
AMBRA1-207ENST00000529553 FCHSD2O94868 740 aa16.44■□□□□ 0.22
AMBRA1-207ENST00000529553 TMF1P82094 1093 aa16.44■□□□□ 0.22
AMBRA1-207ENST00000529553 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
AMBRA1-207ENST00000529553 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
AMBRA1-207ENST00000529553 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
AMBRA1-207ENST00000529553 GNPATO15228 680 aa16.43■□□□□ 0.22
AMBRA1-207ENST00000529553 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
AMBRA1-207ENST00000529553 C10orf71Q711Q0 1435 aa16.43■□□□□ 0.22
AMBRA1-207ENST00000529553 DPEP1P16444 411 aa16.42■□□□□ 0.22
AMBRA1-207ENST00000529553 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
AMBRA1-207ENST00000529553 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
AMBRA1-207ENST00000529553 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
AMBRA1-207ENST00000529553 INSRP06213 1382 aa16.41■□□□□ 0.22
AMBRA1-207ENST00000529553 KCNA3P22001 575 aa16.41■□□□□ 0.22
AMBRA1-207ENST00000529553 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms