RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 HDAC1Q13547 482 aaPredicted RBP19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 DDX19BQ9UMR2 479 aa19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 BECN1Q14457 450 aa19.96■□□□□ 0.79
TM9SF1-208ENST00000529332 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
TM9SF1-208ENST00000529332 TMEM57Q8N5G2 664 aa19.96■□□□□ 0.79
TM9SF1-208ENST00000529332 RSPH6AQ9H0K4 717 aa19.96■□□□□ 0.79
TM9SF1-208ENST00000529332 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
TM9SF1-208ENST00000529332 ARHGEF10O15013 1369 aa19.95■□□□□ 0.78
TM9SF1-208ENST00000529332 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
TM9SF1-208ENST00000529332 HOXC9P31274 260 aa19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 GCP02774 474 aa19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 HMOX1P09601 288 aa19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 DDX17Q92841 729 aaKnown RBP19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 ZBTB40Q9NUA8 1239 aa19.93■□□□□ 0.78
TM9SF1-208ENST00000529332 MED1Q15648 1581 aaPredicted RBP19.92■□□□□ 0.78
TM9SF1-208ENST00000529332 SPATA31A3Q5VYP0 1347 aa19.91■□□□□ 0.78
TM9SF1-208ENST00000529332 KIF16BQ96L93 1317 aa19.91■□□□□ 0.78
TM9SF1-208ENST00000529332 SMC5Q8IY18 1101 aa19.91■□□□□ 0.78
TM9SF1-208ENST00000529332 SLKQ9H2G2 1235 aaPredicted RBP19.91■□□□□ 0.78
TM9SF1-208ENST00000529332 ALDH1L2Q3SY69 923 aa19.9■□□□□ 0.78
TM9SF1-208ENST00000529332 TBC1D2Q9BYX2 928 aa19.9■□□□□ 0.78
TM9SF1-208ENST00000529332 ANTXR1Q9H6X2 564 aa19.9■□□□□ 0.78
TM9SF1-208ENST00000529332 IP6K1Q92551 441 aa19.9■□□□□ 0.78
TM9SF1-208ENST00000529332 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
TM9SF1-208ENST00000529332 CRYBG1Q9Y4K1 1723 aa19.89■□□□□ 0.78
TM9SF1-208ENST00000529332 IPO8O15397 1037 aaKnown RBP19.89■□□□□ 0.77
TM9SF1-208ENST00000529332 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
TM9SF1-208ENST00000529332 SULT6B1Q6IMI4 303 aa19.88■□□□□ 0.77
TM9SF1-208ENST00000529332 ARHGEF25Q86VW2 580 aa19.87■□□□□ 0.77
TM9SF1-208ENST00000529332 NFE2L2Q16236 605 aa19.87■□□□□ 0.77
TM9SF1-208ENST00000529332 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
TM9SF1-208ENST00000529332 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
TM9SF1-208ENST00000529332 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
TM9SF1-208ENST00000529332 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
TM9SF1-208ENST00000529332 ROBO1Q9Y6N7 1651 aa19.86■□□□□ 0.77
TM9SF1-208ENST00000529332 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
TM9SF1-208ENST00000529332 BRPF1P55201 1214 aaPredicted RBP19.85■□□□□ 0.77
TM9SF1-208ENST00000529332 KDRP35968 1356 aa19.85■□□□□ 0.77
TM9SF1-208ENST00000529332 ABCC6O95255 1503 aa19.85■□□□□ 0.77
TM9SF1-208ENST00000529332 DLG5Q8TDM6 1919 aa19.85■□□□□ 0.77
TM9SF1-208ENST00000529332 C22orf23Q9BZE7 217 aa19.84■□□□□ 0.77
TM9SF1-208ENST00000529332 MFAP1P55081 439 aaKnown RBP19.84■□□□□ 0.77
TM9SF1-208ENST00000529332 AEBP1Q8IUX7 1158 aa19.84■□□□□ 0.77
TM9SF1-208ENST00000529332 VAMP4O75379 141 aa19.83■□□□□ 0.77
TM9SF1-208ENST00000529332 NUCB1Q02818 461 aa19.83■□□□□ 0.77
TM9SF1-208ENST00000529332 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.77
TM9SF1-208ENST00000529332 EYA1Q99502 592 aa19.83■□□□□ 0.77
TM9SF1-208ENST00000529332 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
TM9SF1-208ENST00000529332 ZNF428Q96B54 188 aa19.82■□□□□ 0.76
TM9SF1-208ENST00000529332 RTN4Q9NQC3 1192 aaKnown RBP19.82■□□□□ 0.76
TM9SF1-208ENST00000529332 MRPL50Q8N5N7 158 aaKnown RBP19.82■□□□□ 0.76
TM9SF1-208ENST00000529332 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
TM9SF1-208ENST00000529332 AHDC1Q5TGY3 1603 aaPredicted RBP19.81■□□□□ 0.76
TM9SF1-208ENST00000529332 ABCA3Q99758 1704 aa19.81■□□□□ 0.76
TM9SF1-208ENST00000529332 RGPD5Q99666 1765 aa19.81■□□□□ 0.76
TM9SF1-208ENST00000529332 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
TM9SF1-208ENST00000529332 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
TM9SF1-208ENST00000529332 LNPKQ9C0E8 428 aa19.8■□□□□ 0.76
TM9SF1-208ENST00000529332 ZBTB7BO15156 539 aaPredicted RBP19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 ZC3H6P61129 1189 aaKnown RBP19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 IFT57Q9NWB7 429 aa19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 CPDO75976 1380 aa19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 MBIPQ9NS73 344 aa19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 RGPD2P0DJD1 1756 aa19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
TM9SF1-208ENST00000529332 COL18A1P39060 1754 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 GNAI1P63096 354 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
TM9SF1-208ENST00000529332 ELL2O00472 640 aaPredicted RBP19.77■□□□□ 0.76
TM9SF1-208ENST00000529332 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
TM9SF1-208ENST00000529332 HAP1P54257 671 aaPredicted RBP19.76■□□□□ 0.75
TM9SF1-208ENST00000529332 C1orf115Q9H7X2 142 aa19.76■□□□□ 0.75
TM9SF1-208ENST00000529332 GAS2L2Q8NHY3 880 aa19.75■□□□□ 0.75
TM9SF1-208ENST00000529332 TOM1O60784 492 aa19.74■□□□□ 0.75
TM9SF1-208ENST00000529332 C8orf58Q8NAV2 365 aa19.74■□□□□ 0.75
TM9SF1-208ENST00000529332 ABCC4O15439 1325 aa19.74■□□□□ 0.75
TM9SF1-208ENST00000529332 KIAA0232Q92628 1395 aa19.74■□□□□ 0.75
TM9SF1-208ENST00000529332 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 TWISTNBQ3B726 338 aaPredicted RBP19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 LRRC59Q96AG4 307 aaKnown RBP19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 PHLPP1O60346 1717 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 ERBB3P21860 1342 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 NBPF6Q5VWK0 638 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 SIRT2Q8IXJ6 389 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 NBPF4Q96M43 638 aa19.73■□□□□ 0.75
TM9SF1-208ENST00000529332 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
TM9SF1-208ENST00000529332 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
TM9SF1-208ENST00000529332 ANKRD45Q5TZF3 282 aa19.72■□□□□ 0.75
TM9SF1-208ENST00000529332 COL22A1Q8NFW1 1626 aaPredicted RBP19.72■□□□□ 0.75
TM9SF1-208ENST00000529332 RBM25P49756 843 aaKnown RBP19.71■□□□□ 0.75
TM9SF1-208ENST00000529332 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
TM9SF1-208ENST00000529332 BMP2KLQ5H9B9 411 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms