RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
LTBP3-210ENST00000528516 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
LTBP3-210ENST00000528516 C17orf53Q8N3J3 647 aaPredicted RBP21.59■■□□□ 1.05
LTBP3-210ENST00000528516 UPF3BQ9BZI7 483 aaKnown RBP21.59■■□□□ 1.05
LTBP3-210ENST00000528516 PDCL2Q8N4E4 241 aa21.59■■□□□ 1.05
LTBP3-210ENST00000528516 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.58■■□□□ 1.05
LTBP3-210ENST00000528516 CGNQ9P2M7 1197 aaKnown RBP21.58■■□□□ 1.05
LTBP3-210ENST00000528516 KDM4AO75164 1064 aa21.58■■□□□ 1.05
LTBP3-210ENST00000528516 ZGPATQ8N5A5 531 aaKnown RBP21.58■■□□□ 1.05
LTBP3-210ENST00000528516 VIRMAQ69YN4 1812 aaKnown RBP21.58■■□□□ 1.04
LTBP3-210ENST00000528516 RIMBP3CA6NJZ7 1639 aa21.58■■□□□ 1.04
LTBP3-210ENST00000528516 RIMBP3BA6NNM3 1639 aa21.58■■□□□ 1.04
LTBP3-210ENST00000528516 RIMBP3Q9UFD9 1639 aa21.58■■□□□ 1.04
LTBP3-210ENST00000528516 NPATQ14207 1427 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 KRT24Q2M2I5 525 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 MYRIPQ8NFW9 859 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 TMEM63CQ9P1W3 806 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 NCKAP5LQ9HCH0 1330 aa21.57■■□□□ 1.04
LTBP3-210ENST00000528516 PSME1Q06323 249 aa21.56■■□□□ 1.04
LTBP3-210ENST00000528516 NEO1Q92859 1461 aa21.56■■□□□ 1.04
LTBP3-210ENST00000528516 TTC12Q9H892 705 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-210ENST00000528516 NPHP1O15259 732 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 UTP14CQ5TAP6 766 aaKnown RBP21.55■■□□□ 1.04
LTBP3-210ENST00000528516 GPT2Q8TD30 523 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 PDLIM2Q96JY6 352 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 USP25Q9UHP3 1055 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 IBTKQ9P2D0 1353 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-210ENST00000528516 NCOA3Q9Y6Q9 1424 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 MBD3O95983 291 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 ZSCAN20P17040 1043 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-210ENST00000528516 KIF2CQ99661 725 aa21.55■■□□□ 1.04
LTBP3-210ENST00000528516 UBTFL1P0CB47 393 aaPredicted RBP21.54■■□□□ 1.04
LTBP3-210ENST00000528516 USHBP1Q8N6Y0 703 aa21.54■■□□□ 1.04
LTBP3-210ENST00000528516 GTPBP4Q9BZE4 634 aaKnown RBP21.54■■□□□ 1.04
LTBP3-210ENST00000528516 MLH3Q9UHC1 1453 aa21.54■■□□□ 1.04
LTBP3-210ENST00000528516 TRPM1Q7Z4N2 1603 aa21.54■■□□□ 1.04
LTBP3-210ENST00000528516 NOLC1Q14978 699 aaKnown RBP eCLIP21.53■■□□□ 1.04
LTBP3-210ENST00000528516 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
LTBP3-210ENST00000528516 SLC52A1Q9NWF4 448 aa21.53■■□□□ 1.04
LTBP3-210ENST00000528516 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
LTBP3-210ENST00000528516 IFIT2P09913 472 aaKnown RBP21.52■■□□□ 1.04
LTBP3-210ENST00000528516 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
LTBP3-210ENST00000528516 GNL2Q13823 731 aaKnown RBP21.52■■□□□ 1.04
LTBP3-210ENST00000528516 SIL1Q9H173 461 aa21.52■■□□□ 1.04
LTBP3-210ENST00000528516 PRDM15P57071 1507 aaPredicted RBP21.52■■□□□ 1.04
LTBP3-210ENST00000528516 KIDINS220Q9ULH0 1771 aa21.52■■□□□ 1.04
LTBP3-210ENST00000528516 DTNBO60941 627 aa21.52■■□□□ 1.04
LTBP3-210ENST00000528516 C1orf141Q5JVX7 400 aa21.52■■□□□ 1.04
LTBP3-210ENST00000528516 PRIMPOLQ96LW4 560 aa21.52■■□□□ 1.04
LTBP3-210ENST00000528516 PHF14O94880 888 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 NUDT16Q96DE0 195 aaKnown RBP21.51■■□□□ 1.03
LTBP3-210ENST00000528516 TOMM22Q9NS69 142 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 INO80Q9ULG1 1556 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-210ENST00000528516 LETM1O95202 739 aaPredicted RBP21.51■■□□□ 1.03
LTBP3-210ENST00000528516 TAF7LQ5H9L4 462 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 GDPD2Q9HCC8 539 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 TSPYL6Q8N831 410 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 GCC1Q96CN9 775 aa21.51■■□□□ 1.03
LTBP3-210ENST00000528516 FIBPO43427 364 aa21.5■■□□□ 1.03
LTBP3-210ENST00000528516 NFE2L2Q16236 605 aa21.5■■□□□ 1.03
LTBP3-210ENST00000528516 C16orf71Q8IYS4 520 aaPredicted RBP21.5■■□□□ 1.03
LTBP3-210ENST00000528516 PTPRTO14522 1441 aa21.5■■□□□ 1.03
LTBP3-210ENST00000528516 VGLL3A8MV65 326 aa21.5■■□□□ 1.03
LTBP3-210ENST00000528516 KIF20AO95235 890 aa21.5■■□□□ 1.03
LTBP3-210ENST00000528516 FYB1O15117 783 aa21.49■■□□□ 1.03
LTBP3-210ENST00000528516 FCHSD2O94868 740 aa21.49■■□□□ 1.03
LTBP3-210ENST00000528516 NSFL1CQ9UNZ2 370 aaKnown RBP21.49■■□□□ 1.03
LTBP3-210ENST00000528516 HDGFL1Q5TGJ6 251 aa21.49■■□□□ 1.03
LTBP3-210ENST00000528516 NUTM1Q86Y26 1132 aa21.49■■□□□ 1.03
LTBP3-210ENST00000528516 GPATCH3Q96I76 525 aa21.49■■□□□ 1.03
LTBP3-210ENST00000528516 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
LTBP3-210ENST00000528516 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
LTBP3-210ENST00000528516 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
LTBP3-210ENST00000528516 ANXA1P04083 346 aa21.48■■□□□ 1.03
LTBP3-210ENST00000528516 U2AF2P26368 475 aaKnown RBP eCLIP21.48■■□□□ 1.03
LTBP3-210ENST00000528516 CREBRFQ8IUR6 639 aa21.48■■□□□ 1.03
LTBP3-210ENST00000528516 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 SCAF11Q99590 1463 aaKnown RBP21.47■■□□□ 1.03
LTBP3-210ENST00000528516 SPC24Q8NBT2 197 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 C14orf93Q9H972 538 aaKnown RBP21.47■■□□□ 1.03
LTBP3-210ENST00000528516 NLRP2Q9NX02 1062 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
LTBP3-210ENST00000528516 TRPM2O94759 1503 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 AEBP1Q8IUX7 1158 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
LTBP3-210ENST00000528516 CCDC61Q9Y6R9 512 aa21.46■■□□□ 1.03
LTBP3-210ENST00000528516 NPC1L1Q9UHC9 1359 aa21.46■■□□□ 1.03
LTBP3-210ENST00000528516 SMC3Q9UQE7 1217 aa21.46■■□□□ 1.03
LTBP3-210ENST00000528516 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
LTBP3-210ENST00000528516 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
LTBP3-210ENST00000528516 BCL2L12Q9HB09 334 aa21.45■■□□□ 1.02
LTBP3-210ENST00000528516 H3BQV1 296 aa21.45■■□□□ 1.02
LTBP3-210ENST00000528516 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
LTBP3-210ENST00000528516 ZNF592Q92610 1267 aa21.45■■□□□ 1.02
LTBP3-210ENST00000528516 ADCY5O95622 1261 aa21.45■■□□□ 1.02
LTBP3-210ENST00000528516 STK3Q13188 491 aa21.44■■□□□ 1.02
LTBP3-210ENST00000528516 ESCO1Q5FWF5 840 aa21.44■■□□□ 1.02
LTBP3-210ENST00000528516 CFAP74Q9C0B2 1584 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms