RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GAS2L2Q8NHY3 880 aa19.28■□□□□ 0.68
USH1C-207ENST00000527720 SOX12O15370 315 aa19.28■□□□□ 0.68
USH1C-207ENST00000527720 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
USH1C-207ENST00000527720 NLRP6P59044 892 aa19.27■□□□□ 0.68
USH1C-207ENST00000527720 RGS12O14924 1447 aa19.27■□□□□ 0.68
USH1C-207ENST00000527720 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
USH1C-207ENST00000527720 EYA1Q99502 592 aa19.27■□□□□ 0.68
USH1C-207ENST00000527720 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
USH1C-207ENST00000527720 LNPKQ9C0E8 428 aa19.26■□□□□ 0.67
USH1C-207ENST00000527720 LTN1O94822 1766 aa19.26■□□□□ 0.67
USH1C-207ENST00000527720 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
USH1C-207ENST00000527720 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
USH1C-207ENST00000527720 RTL1A6NKG5 1358 aa19.25■□□□□ 0.67
USH1C-207ENST00000527720 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
USH1C-207ENST00000527720 SIRT2Q8IXJ6 389 aa19.25■□□□□ 0.67
USH1C-207ENST00000527720 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
USH1C-207ENST00000527720 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
USH1C-207ENST00000527720 C1orf115Q9H7X2 142 aa19.24■□□□□ 0.67
USH1C-207ENST00000527720 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
USH1C-207ENST00000527720 HOXC9P31274 260 aa19.23■□□□□ 0.67
USH1C-207ENST00000527720 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
USH1C-207ENST00000527720 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
USH1C-207ENST00000527720 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
USH1C-207ENST00000527720 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
USH1C-207ENST00000527720 PHRF1Q9P1Y6 1649 aaKnown RBP19.21■□□□□ 0.67
USH1C-207ENST00000527720 RPAP2Q8IXW5 612 aaPredicted RBP19.21■□□□□ 0.67
USH1C-207ENST00000527720 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
USH1C-207ENST00000527720 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
USH1C-207ENST00000527720 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
USH1C-207ENST00000527720 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
USH1C-207ENST00000527720 FOXO3O43524 673 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 ADGRL3Q9HAR2 1447 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 TBC1D2Q9BYX2 928 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
USH1C-207ENST00000527720 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
USH1C-207ENST00000527720 N4BP2Q86UW6 1770 aaPredicted RBP19.19■□□□□ 0.66
USH1C-207ENST00000527720 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
USH1C-207ENST00000527720 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
USH1C-207ENST00000527720 NFAT5O94916 1531 aa19.17■□□□□ 0.66
USH1C-207ENST00000527720 EIF5BO60841 1220 aaKnown RBP19.17■□□□□ 0.66
USH1C-207ENST00000527720 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
USH1C-207ENST00000527720 MSH6P52701 1360 aa19.17■□□□□ 0.66
USH1C-207ENST00000527720 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
USH1C-207ENST00000527720 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
USH1C-207ENST00000527720 CCT4P50991 539 aaKnown RBP19.14■□□□□ 0.66
USH1C-207ENST00000527720 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.66
USH1C-207ENST00000527720 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.66
USH1C-207ENST00000527720 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
USH1C-207ENST00000527720 FRAT2O75474 233 aaPredicted RBP19.13■□□□□ 0.65
USH1C-207ENST00000527720 IP6K1Q92551 441 aa19.13■□□□□ 0.65
USH1C-207ENST00000527720 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
USH1C-207ENST00000527720 GSE1Q14687 1217 aa19.12■□□□□ 0.65
USH1C-207ENST00000527720 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
USH1C-207ENST00000527720 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
USH1C-207ENST00000527720 NPHP4O75161 1426 aaPredicted RBP19.12■□□□□ 0.65
USH1C-207ENST00000527720 PRKCSHP14314 528 aaPredicted RBP19.11■□□□□ 0.65
USH1C-207ENST00000527720 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
USH1C-207ENST00000527720 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
USH1C-207ENST00000527720 SNX21Q969T3 373 aa19.11■□□□□ 0.65
USH1C-207ENST00000527720 HMMRO75330 724 aa19.1■□□□□ 0.65
USH1C-207ENST00000527720 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
USH1C-207ENST00000527720 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
USH1C-207ENST00000527720 MEIS3Q99687 375 aa19.1■□□□□ 0.65
USH1C-207ENST00000527720 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
USH1C-207ENST00000527720 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 CDC45O75419 566 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 PSME1Q06323 249 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 HSCBQ8IWL3 235 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 IL17REQ8NFR9 667 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 BCL11AQ9H165 835 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 RGPD2P0DJD1 1756 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
USH1C-207ENST00000527720 G2E3Q7L622 706 aa19.08■□□□□ 0.65
USH1C-207ENST00000527720 CEMIPQ8WUJ3 1361 aa19.08■□□□□ 0.64
USH1C-207ENST00000527720 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
USH1C-207ENST00000527720 TTC22Q5TAA0 569 aa19.07■□□□□ 0.64
USH1C-207ENST00000527720 LTV1Q96GA3 475 aaPredicted RBP19.07■□□□□ 0.64
USH1C-207ENST00000527720 SLIT3O75094 1523 aa19.07■□□□□ 0.64
USH1C-207ENST00000527720 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
USH1C-207ENST00000527720 FLIIQ13045 1269 aa19.06■□□□□ 0.64
USH1C-207ENST00000527720 NCOA3Q9Y6Q9 1424 aa19.06■□□□□ 0.64
USH1C-207ENST00000527720 GSPT1P15170 499 aaKnown RBP19.05■□□□□ 0.64
USH1C-207ENST00000527720 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
USH1C-207ENST00000527720 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
USH1C-207ENST00000527720 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 CHMP5Q9NZZ3 219 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 F6X3S4 739 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 GNAI2P04899 355 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 GNAI3P08754 354 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 CAMTA1Q9Y6Y1 1673 aa19.04■□□□□ 0.64
USH1C-207ENST00000527720 FKBP5Q13451 457 aaPredicted RBP19.03■□□□□ 0.64
USH1C-207ENST00000527720 NBPF6Q5VWK0 638 aa19.03■□□□□ 0.64
USH1C-207ENST00000527720 NBPF4Q96M43 638 aa19.03■□□□□ 0.64
USH1C-207ENST00000527720 HOXB7P09629 217 aa19.02■□□□□ 0.64
USH1C-207ENST00000527720 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms