RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 C19orf44Q9H6X5 657 aa23.7■■□□□ 1.38
VPS51-204ENST00000527646 USP19O94966 1318 aa23.69■■□□□ 1.38
VPS51-204ENST00000527646 HAP1P54257 671 aaPredicted RBP23.69■■□□□ 1.38
VPS51-204ENST00000527646 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
VPS51-204ENST00000527646 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
VPS51-204ENST00000527646 ORAI2Q96SN7 254 aa23.69■■□□□ 1.38
VPS51-204ENST00000527646 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
VPS51-204ENST00000527646 MCM10Q7L590 875 aa23.68■■□□□ 1.38
VPS51-204ENST00000527646 UBE2Q2Q8WVN8 375 aa23.68■■□□□ 1.38
VPS51-204ENST00000527646 FOXO3O43524 673 aa23.68■■□□□ 1.38
VPS51-204ENST00000527646 LTN1O94822 1766 aa23.67■■□□□ 1.38
VPS51-204ENST00000527646 ELL2O00472 640 aaPredicted RBP23.67■■□□□ 1.38
VPS51-204ENST00000527646 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
VPS51-204ENST00000527646 RWDD1Q9H446 243 aaPredicted RBP23.67■■□□□ 1.38
VPS51-204ENST00000527646 ARHGAP45Q92619 1136 aa23.66■■□□□ 1.38
VPS51-204ENST00000527646 NFAT5O94916 1531 aa23.65■■□□□ 1.38
VPS51-204ENST00000527646 CHL1O00533 1208 aa23.65■■□□□ 1.38
VPS51-204ENST00000527646 MRPL50Q8N5N7 158 aaKnown RBP23.65■■□□□ 1.38
VPS51-204ENST00000527646 C8orf58Q8NAV2 365 aa23.65■■□□□ 1.38
VPS51-204ENST00000527646 TMEM57Q8N5G2 664 aa23.65■■□□□ 1.38
VPS51-204ENST00000527646 IP6K1Q92551 441 aa23.65■■□□□ 1.38
VPS51-204ENST00000527646 LTV1Q96GA3 475 aaPredicted RBP23.65■■□□□ 1.38
VPS51-204ENST00000527646 KIF1AQ12756 1690 aa23.64■■□□□ 1.38
VPS51-204ENST00000527646 L1TD1Q5T7N2 865 aaKnown RBP23.64■■□□□ 1.37
VPS51-204ENST00000527646 C1orf167Q5SNV9 1468 aa23.63■■□□□ 1.37
VPS51-204ENST00000527646 ATF3P18847 181 aa23.62■■□□□ 1.37
VPS51-204ENST00000527646 HTATSF1O43719 755 aaKnown RBP23.62■■□□□ 1.37
VPS51-204ENST00000527646 CHMP4BQ9H444 224 aaKnown RBP23.62■■□□□ 1.37
VPS51-204ENST00000527646 KIAA0232Q92628 1395 aa23.61■■□□□ 1.37
VPS51-204ENST00000527646 CRB1P82279 1406 aa23.61■■□□□ 1.37
VPS51-204ENST00000527646 XPCQ01831 940 aaPredicted RBP23.61■■□□□ 1.37
VPS51-204ENST00000527646 NCOA3Q9Y6Q9 1424 aa23.6■■□□□ 1.37
VPS51-204ENST00000527646 EIF5BO60841 1220 aaKnown RBP23.6■■□□□ 1.37
VPS51-204ENST00000527646 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
VPS51-204ENST00000527646 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
VPS51-204ENST00000527646 KRT28Q7Z3Y7 464 aa23.59■■□□□ 1.37
VPS51-204ENST00000527646 PHRF1Q9P1Y6 1649 aaKnown RBP23.59■■□□□ 1.37
VPS51-204ENST00000527646 DCCP43146 1447 aa23.59■■□□□ 1.37
VPS51-204ENST00000527646 ZBTB7CA1YPR0 619 aa23.59■■□□□ 1.37
VPS51-204ENST00000527646 UPF2Q9HAU5 1272 aaKnown RBP23.59■■□□□ 1.37
VPS51-204ENST00000527646 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
VPS51-204ENST00000527646 GCP02774 474 aa23.58■■□□□ 1.37
VPS51-204ENST00000527646 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
VPS51-204ENST00000527646 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
VPS51-204ENST00000527646 ZBTB40Q9NUA8 1239 aa23.57■■□□□ 1.36
VPS51-204ENST00000527646 SLIT3O75094 1523 aa23.57■■□□□ 1.36
VPS51-204ENST00000527646 TRPM3Q9HCF6 1732 aaPredicted RBP23.56■■□□□ 1.36
VPS51-204ENST00000527646 TSPYL4Q9UJ04 414 aa23.56■■□□□ 1.36
VPS51-204ENST00000527646 HDAC1Q13547 482 aaPredicted RBP23.56■■□□□ 1.36
VPS51-204ENST00000527646 SEC24BO95487 1268 aa23.55■■□□□ 1.36
VPS51-204ENST00000527646 HSPA2P54652 639 aa23.55■■□□□ 1.36
VPS51-204ENST00000527646 ANTXR1Q9H6X2 564 aa23.55■■□□□ 1.36
VPS51-204ENST00000527646 MAP3K5Q99683 1374 aa23.55■■□□□ 1.36
VPS51-204ENST00000527646 MST1RQ04912 1400 aa23.54■■□□□ 1.36
VPS51-204ENST00000527646 ABCC4O15439 1325 aa23.54■■□□□ 1.36
VPS51-204ENST00000527646 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
VPS51-204ENST00000527646 CADPS2Q86UW7 1296 aa23.53■■□□□ 1.36
VPS51-204ENST00000527646 ARHGEF25Q86VW2 580 aa23.53■■□□□ 1.36
VPS51-204ENST00000527646 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
VPS51-204ENST00000527646 KRT24Q2M2I5 525 aa23.52■■□□□ 1.36
VPS51-204ENST00000527646 NBPF6Q5VWK0 638 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 NBPF4Q96M43 638 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 PLEKHG5O94827 1062 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 TBC1D32Q96NH3 1257 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 LRRC37A3O60309 1634 aa23.51■■□□□ 1.35
VPS51-204ENST00000527646 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
VPS51-204ENST00000527646 ZBTB7BO15156 539 aaPredicted RBP23.49■■□□□ 1.35
VPS51-204ENST00000527646 MSH6P52701 1360 aa23.49■■□□□ 1.35
VPS51-204ENST00000527646 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
VPS51-204ENST00000527646 PTPRCP08575 1304 aa23.47■■□□□ 1.35
VPS51-204ENST00000527646 ALS2Q96Q42 1657 aa23.47■■□□□ 1.35
VPS51-204ENST00000527646 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
VPS51-204ENST00000527646 IL17REQ8NFR9 667 aa23.46■■□□□ 1.35
VPS51-204ENST00000527646 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
VPS51-204ENST00000527646 ANKRD24Q8TF21 1146 aa23.45■■□□□ 1.34
VPS51-204ENST00000527646 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.34
VPS51-204ENST00000527646 SMC5Q8IY18 1101 aa23.44■■□□□ 1.34
VPS51-204ENST00000527646 TBC1D2Q9BYX2 928 aa23.44■■□□□ 1.34
VPS51-204ENST00000527646 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
VPS51-204ENST00000527646 SLC4A2P04920 1241 aa23.43■■□□□ 1.34
VPS51-204ENST00000527646 SOS1Q07889 1333 aaPredicted RBP23.43■■□□□ 1.34
VPS51-204ENST00000527646 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
VPS51-204ENST00000527646 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
VPS51-204ENST00000527646 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
VPS51-204ENST00000527646 INTS3Q68E01 1043 aaKnown RBP23.42■■□□□ 1.34
VPS51-204ENST00000527646 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
VPS51-204ENST00000527646 RRAGDQ9NQL2 400 aaPredicted RBP23.42■■□□□ 1.34
VPS51-204ENST00000527646 GOLGA6L3A6NEY3 463 aa23.41■■□□□ 1.34
VPS51-204ENST00000527646 NCAPD2Q15021 1401 aa23.41■■□□□ 1.34
VPS51-204ENST00000527646 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
VPS51-204ENST00000527646 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
VPS51-204ENST00000527646 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
VPS51-204ENST00000527646 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.34
VPS51-204ENST00000527646 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.34
VPS51-204ENST00000527646 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.34
VPS51-204ENST00000527646 DDX17Q92841 729 aaKnown RBP23.39■■□□□ 1.34
VPS51-204ENST00000527646 MED1Q15648 1581 aaPredicted RBP23.39■■□□□ 1.34
VPS51-204ENST00000527646 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.33
VPS51-204ENST00000527646 AXIN2Q9Y2T1 843 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms