RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 CCER1Q8TC90 406 aaPredicted RBP9.49□□□□□ -0.89
PPFIA1-209ENST00000527612 EXOC5O00471 708 aa9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 KCNQ2O43526 872 aa9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 HSPA5P11021 654 aaKnown RBP9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 PROM2Q8N271 834 aa9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 UBR3Q6ZT12 1888 aa9.48□□□□□ -0.89
PPFIA1-209ENST00000527612 AMPHP49418 695 aa9.47□□□□□ -0.89
PPFIA1-209ENST00000527612 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPFIA1-209ENST00000527612 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
PPFIA1-209ENST00000527612 COL5A3P25940 1745 aaPredicted RBP9.47□□□□□ -0.89
PPFIA1-209ENST00000527612 CICQ96RK0 1608 aaPredicted RBP9.46□□□□□ -0.89
PPFIA1-209ENST00000527612 ZNF831Q5JPB2 1677 aa9.46□□□□□ -0.89
PPFIA1-209ENST00000527612 SCN11AQ9UI33 1791 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 HSP90AB2PQ58FF8 381 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 NBPF6Q5VWK0 638 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 NBPF4Q96M43 638 aa9.46□□□□□ -0.9
PPFIA1-209ENST00000527612 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
PPFIA1-209ENST00000527612 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
PPFIA1-209ENST00000527612 PDGFDQ9GZP0 370 aaPredicted RBP9.45□□□□□ -0.9
PPFIA1-209ENST00000527612 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
PPFIA1-209ENST00000527612 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
PPFIA1-209ENST00000527612 C4AP0C0L4 1744 aa9.43□□□□□ -0.9
PPFIA1-209ENST00000527612 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
PPFIA1-209ENST00000527612 WASHC2AQ641Q2 1341 aa9.43□□□□□ -0.9
PPFIA1-209ENST00000527612 PCDH11XQ9BZA7 1347 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 PCDH11YQ9BZA8 1340 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 DDX54Q8TDD1 881 aaKnown RBP9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 TJP1Q07157 1748 aa9.42□□□□□ -0.9
PPFIA1-209ENST00000527612 COL3A1P02461 1466 aaPredicted RBP9.41□□□□□ -0.9
PPFIA1-209ENST00000527612 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
PPFIA1-209ENST00000527612 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
PPFIA1-209ENST00000527612 CHD4Q14839 1912 aa9.41□□□□□ -0.9
PPFIA1-209ENST00000527612 SIPA1L3O60292 1781 aaPredicted RBP9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 CYP27B1O15528 508 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 PTGER2P43116 358 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 SLC15A2Q16348 729 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 RAPGEF4Q8WZA2 1011 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 PANK3Q9H999 370 aa9.4□□□□□ -0.9
PPFIA1-209ENST00000527612 KDRP35968 1356 aa9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 SGIP1Q9BQI5 828 aa9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 MRC1P22897 1456 aa9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-209ENST00000527612 PPM1GO15355 546 aaPredicted RBP9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 TNNT2P45379 298 aaPredicted RBP9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 EYA1Q99502 592 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 SPON1Q9HCB6 807 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 STK32BQ9NY57 414 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 KIAA1551Q9HCM1 1747 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 KIF13BQ9NQT8 1826 aa9.38□□□□□ -0.91
PPFIA1-209ENST00000527612 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 ZBTB7AO95365 584 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 KCNQ4P56696 695 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 SYTL4Q96C24 671 aaPredicted RBP9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
PPFIA1-209ENST00000527612 BRCA1P38398 1863 aaKnown RBP9.35□□□□□ -0.91
PPFIA1-209ENST00000527612 NKX1-1Q15270 411 aaPredicted RBP9.35□□□□□ -0.91
PPFIA1-209ENST00000527612 MTFR1LQ9H019 292 aa9.35□□□□□ -0.91
PPFIA1-209ENST00000527612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.912e-7■■□□□ 12.3
PPFIA1-209ENST00000527612 NPC1L1Q9UHC9 1359 aa9.35□□□□□ -0.91
PPFIA1-209ENST00000527612 PER1O15534 1290 aaPredicted RBP9.34□□□□□ -0.91
PPFIA1-209ENST00000527612 PHKG2P15735 406 aa9.34□□□□□ -0.91
PPFIA1-209ENST00000527612 AEBP1Q8IUX7 1158 aa9.34□□□□□ -0.91
PPFIA1-209ENST00000527612 CCNL1Q9UK58 526 aaPredicted RBP9.34□□□□□ -0.91
PPFIA1-209ENST00000527612 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
PPFIA1-209ENST00000527612 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
PPFIA1-209ENST00000527612 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 MORC1Q86VD1 984 aa9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 AMIGO3Q86WK7 504 aa9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 PIGBQ92521 554 aa9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 PPP1R1BQ9UD71 204 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-209ENST00000527612 IL13P35225 146 aa9.31□□□□□ -0.92
PPFIA1-209ENST00000527612 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
PPFIA1-209ENST00000527612 FHDC1Q9C0D6 1143 aaPredicted RBP9.31□□□□□ -0.92
PPFIA1-209ENST00000527612 SCN7AQ01118 1682 aa9.31□□□□□ -0.92
PPFIA1-209ENST00000527612 IFNL2Q8IZJ0 200 aa9.3□□□□□ -0.92
PPFIA1-209ENST00000527612 N4BP2Q86UW6 1770 aaPredicted RBP9.29□□□□□ -0.92
PPFIA1-209ENST00000527612 LINC00116Q8NCU8 138 aa9.29□□□□□ -0.92
PPFIA1-209ENST00000527612 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
PPFIA1-209ENST00000527612 TMOD3Q9NYL9 352 aa9.29□□□□□ -0.92
PPFIA1-209ENST00000527612 TFCP2L1Q9NZI6 479 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms