RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 EYA1Q99502 592 aa14.97□□□□□ -0.01
CHMP1B-201ENST00000526991 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
CHMP1B-201ENST00000526991 MTHFSDQ2M296 383 aaKnown RBP14.96□□□□□ -0.01
CHMP1B-201ENST00000526991 SIRT1Q96EB6 747 aa14.96□□□□□ -0.01
CHMP1B-201ENST00000526991 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
CHMP1B-201ENST00000526991 MED14O60244 1454 aa14.96□□□□□ -0.01
CHMP1B-201ENST00000526991 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
CHMP1B-201ENST00000526991 HSCBQ8IWL3 235 aa14.96□□□□□ -0.02
CHMP1B-201ENST00000526991 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.02
CHMP1B-201ENST00000526991 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
CHMP1B-201ENST00000526991 ANKRD26Q9UPS8 1709 aa14.95□□□□□ -0.02
CHMP1B-201ENST00000526991 IFT57Q9NWB7 429 aa14.94□□□□□ -0.02
CHMP1B-201ENST00000526991 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
CHMP1B-201ENST00000526991 CFAP44Q96MT7 982 aa14.93□□□□□ -0.02
CHMP1B-201ENST00000526991 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
CHMP1B-201ENST00000526991 ITSN1Q15811 1721 aa14.93□□□□□ -0.02
CHMP1B-201ENST00000526991 SMARCA5O60264 1052 aaPredicted RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 SLC4A10Q6U841 1118 aa14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 CD2BP2O95400 341 aaKnown RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 HSP90AB1P08238 724 aaKnown RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
CHMP1B-201ENST00000526991 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 PROSER2Q86WR7 435 aaPredicted RBP14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 DHX37Q8IY37 1157 aaKnown RBP14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 RTF1Q92541 710 aaKnown RBP14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 AATKQ6ZMQ8 1374 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 F6X3S4 739 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 ZNF853P0CG23 659 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 MCM4P33991 863 aa14.91□□□□□ -0.02
CHMP1B-201ENST00000526991 OVOS2A0A0J9YW53 1432 aa14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 OVOS2Q6IE36 1432 aa14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 TSPYL4Q9UJ04 414 aa14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 VIRMAQ69YN4 1812 aaKnown RBP14.9□□□□□ -0.02
CHMP1B-201ENST00000526991 HOXC9P31274 260 aa14.89□□□□□ -0.03
CHMP1B-201ENST00000526991 CHMP5Q9NZZ3 219 aa14.89□□□□□ -0.03
CHMP1B-201ENST00000526991 CEP170BQ9Y4F5 1589 aaPredicted RBP14.89□□□□□ -0.03
CHMP1B-201ENST00000526991 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
CHMP1B-201ENST00000526991 MON2Q7Z3U7 1717 aa14.88□□□□□ -0.03
CHMP1B-201ENST00000526991 LMOD3Q0VAK6 560 aa14.88□□□□□ -0.03
CHMP1B-201ENST00000526991 SLIT1O75093 1534 aa14.88□□□□□ -0.03
CHMP1B-201ENST00000526991 G2E3Q7L622 706 aa14.88□□□□□ -0.03
CHMP1B-201ENST00000526991 GCC1Q96CN9 775 aa14.88□□□□□ -0.03
CHMP1B-201ENST00000526991 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 BMP2KLQ5H9B9 411 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 ABCC4O15439 1325 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 PEAK1Q9H792 1746 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 MEIS3Q99687 375 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 PANK2Q9BZ23 570 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 DLG5Q8TDM6 1919 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 KNDC1Q76NI1 1749 aa14.87□□□□□ -0.03
CHMP1B-201ENST00000526991 TRAK2O60296 914 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 GSPT1P15170 499 aaKnown RBP14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 AKAP12Q02952 1782 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 FLT4P35916 1363 aa14.86□□□□□ -0.03
CHMP1B-201ENST00000526991 TSHZ3Q63HK5 1081 aa14.85□□□□□ -0.03
CHMP1B-201ENST00000526991 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
CHMP1B-201ENST00000526991 ANXA1P04083 346 aa14.85□□□□□ -0.03
CHMP1B-201ENST00000526991 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
CHMP1B-201ENST00000526991 KIF2CQ99661 725 aa14.85□□□□□ -0.03
CHMP1B-201ENST00000526991 PLEKHM2Q8IWE5 1019 aa14.84□□□□□ -0.03
CHMP1B-201ENST00000526991 RBM25P49756 843 aaKnown RBP14.84□□□□□ -0.03
CHMP1B-201ENST00000526991 PTCH1Q13635 1447 aa14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 LGR6Q9HBX8 967 aa14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 SSH2Q76I76 1423 aa14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 BRPF1P55201 1214 aaPredicted RBP14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 MPRIPQ6WCQ1 1025 aa14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
CHMP1B-201ENST00000526991 GOLGA6L3A6NEY3 463 aa14.82□□□□□ -0.04
CHMP1B-201ENST00000526991 CHMP4BQ9H444 224 aaKnown RBP14.82□□□□□ -0.04
CHMP1B-201ENST00000526991 CHL1O00533 1208 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 KCNQ3O43525 872 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 IL17REQ8NFR9 667 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 CDC45O75419 566 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 GAS2L2Q8NHY3 880 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 AXIN2Q9Y2T1 843 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 MSH6P52701 1360 aa14.81□□□□□ -0.04
CHMP1B-201ENST00000526991 GCP02774 474 aa14.8□□□□□ -0.04
CHMP1B-201ENST00000526991 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
CHMP1B-201ENST00000526991 DCTPP1Q9H773 170 aa14.8□□□□□ -0.04
CHMP1B-201ENST00000526991 SSFA2P28290 1259 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 EXOC6BQ9Y2D4 811 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 GNAT3A8MTJ3 354 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 KRT28Q7Z3Y7 464 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 NPHP4O75161 1426 aaPredicted RBP14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 IGSF1Q8N6C5 1336 aa14.79□□□□□ -0.04
CHMP1B-201ENST00000526991 FKBP5Q13451 457 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms