RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 EYA1Q99502 592 aa21.92■■□□□ 1.1
CHD7-204ENST00000526846 PTF1AQ7RTS3 328 aa21.91■■□□□ 1.1
CHD7-204ENST00000526846 EN1Q05925 392 aaPredicted RBP21.9■■□□□ 1.1
CHD7-204ENST00000526846 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.1
CHD7-204ENST00000526846 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
CHD7-204ENST00000526846 CAMKK2Q96RR4 588 aa21.89■■□□□ 1.09
CHD7-204ENST00000526846 ZCRB1Q8TBF4 217 aaKnown RBP21.88■■□□□ 1.09
CHD7-204ENST00000526846 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
CHD7-204ENST00000526846 COL3A1P02461 1466 aaPredicted RBP21.88■■□□□ 1.09
CHD7-204ENST00000526846 PARD3Q8TEW0 1356 aa21.87■■□□□ 1.09
CHD7-204ENST00000526846 APBA3O96018 575 aa21.87■■□□□ 1.09
CHD7-204ENST00000526846 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
CHD7-204ENST00000526846 ITGB4P16144 1822 aa21.87■■□□□ 1.09
CHD7-204ENST00000526846 TATP17735 454 aaPredicted RBP21.86■■□□□ 1.09
CHD7-204ENST00000526846 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
CHD7-204ENST00000526846 EZH2Q15910 746 aaKnown RBP21.86■■□□□ 1.09
CHD7-204ENST00000526846 MTHFSP49914 203 aa21.85■■□□□ 1.09
CHD7-204ENST00000526846 PLEKHG2Q9H7P9 1386 aa21.85■■□□□ 1.09
CHD7-204ENST00000526846 KCNQ2O43526 872 aa21.84■■□□□ 1.09
CHD7-204ENST00000526846 DDX54Q8TDD1 881 aaKnown RBP21.84■■□□□ 1.09
CHD7-204ENST00000526846 IL13P35225 146 aa21.83■■□□□ 1.09
CHD7-204ENST00000526846 PLSCR1O15162 318 aa21.82■■□□□ 1.08
CHD7-204ENST00000526846 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
CHD7-204ENST00000526846 KDRP35968 1356 aa21.82■■□□□ 1.08
CHD7-204ENST00000526846 LY75O60449 1722 aa21.81■■□□□ 1.08
CHD7-204ENST00000526846 CYP27B1O15528 508 aa21.81■■□□□ 1.08
CHD7-204ENST00000526846 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
CHD7-204ENST00000526846 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
CHD7-204ENST00000526846 VIRMAQ69YN4 1812 aaKnown RBP21.8■■□□□ 1.08
CHD7-204ENST00000526846 CNGB1Q14028 1251 aaPredicted RBP21.79■■□□□ 1.08
CHD7-204ENST00000526846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.083e-7■□□□□ 11
CHD7-204ENST00000526846 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
CHD7-204ENST00000526846 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
CHD7-204ENST00000526846 PROM2Q8N271 834 aa21.77■■□□□ 1.08
CHD7-204ENST00000526846 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
CHD7-204ENST00000526846 PPP2R1AP30153 589 aa21.74■■□□□ 1.07
CHD7-204ENST00000526846 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
CHD7-204ENST00000526846 PRIM1P49642 420 aaKnown RBP21.73■■□□□ 1.07
CHD7-204ENST00000526846 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
CHD7-204ENST00000526846 SCN11AQ9UI33 1791 aa21.73■■□□□ 1.07
CHD7-204ENST00000526846 DIAPH1O60610 1272 aaKnown RBP21.72■■□□□ 1.07
CHD7-204ENST00000526846 PHKG2P15735 406 aa21.71■■□□□ 1.07
CHD7-204ENST00000526846 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
CHD7-204ENST00000526846 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
CHD7-204ENST00000526846 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
CHD7-204ENST00000526846 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
CHD7-204ENST00000526846 CASZ1Q86V15 1759 aa21.69■■□□□ 1.06
CHD7-204ENST00000526846 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
CHD7-204ENST00000526846 IFNL2Q8IZJ0 200 aa21.68■■□□□ 1.06
CHD7-204ENST00000526846 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
CHD7-204ENST00000526846 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
CHD7-204ENST00000526846 LRP5O75197 1615 aa21.68■■□□□ 1.06
CHD7-204ENST00000526846 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
CHD7-204ENST00000526846 PSDA5PKW4 1024 aaPredicted RBP21.67■■□□□ 1.06
CHD7-204ENST00000526846 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
CHD7-204ENST00000526846 HMOX1P09601 288 aa21.66■■□□□ 1.06
CHD7-204ENST00000526846 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
CHD7-204ENST00000526846 AMOTQ4VCS5 1084 aa21.66■■□□□ 1.06
CHD7-204ENST00000526846 PLEKHO1Q53GL0 409 aaPredicted RBP21.66■■□□□ 1.06
CHD7-204ENST00000526846 C5P01031 1676 aa21.65■■□□□ 1.06
CHD7-204ENST00000526846 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.05
CHD7-204ENST00000526846 LRRC4BQ9NT99 713 aa21.64■■□□□ 1.05
CHD7-204ENST00000526846 SRCAPQ6ZRS2 3230 aa21.64■■□□□ 1.05
CHD7-204ENST00000526846 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
CHD7-204ENST00000526846 PIGBQ92521 554 aa21.62■■□□□ 1.05
CHD7-204ENST00000526846 ZNF831Q5JPB2 1677 aa21.61■■□□□ 1.05
CHD7-204ENST00000526846 NBPF14Q5TI25 921 aa21.61■■□□□ 1.05
CHD7-204ENST00000526846 MPRIPQ6WCQ1 1025 aa21.61■■□□□ 1.05
CHD7-204ENST00000526846 MRC1P22897 1456 aa21.6■■□□□ 1.05
CHD7-204ENST00000526846 U2SURPO15042 1029 aaKnown RBP21.6■■□□□ 1.05
CHD7-204ENST00000526846 SLC27A3Q5K4L6 730 aa21.6■■□□□ 1.05
CHD7-204ENST00000526846 DCAF5Q96JK2 942 aa21.6■■□□□ 1.05
CHD7-204ENST00000526846 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
CHD7-204ENST00000526846 HSP90AB1P08238 724 aaKnown RBP21.59■■□□□ 1.05
CHD7-204ENST00000526846 RALBP1Q15311 655 aa21.59■■□□□ 1.05
CHD7-204ENST00000526846 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
CHD7-204ENST00000526846 RSPH6AQ9H0K4 717 aa21.58■■□□□ 1.05
CHD7-204ENST00000526846 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
CHD7-204ENST00000526846 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
CHD7-204ENST00000526846 AKAP4Q5JQC9 854 aa21.57■■□□□ 1.04
CHD7-204ENST00000526846 DLG5Q8TDM6 1919 aa21.57■■□□□ 1.04
CHD7-204ENST00000526846 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
CHD7-204ENST00000526846 KCNQ4P56696 695 aa21.56■■□□□ 1.04
CHD7-204ENST00000526846 SLC15A2Q16348 729 aa21.56■■□□□ 1.04
CHD7-204ENST00000526846 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
CHD7-204ENST00000526846 C1orf141Q5JVX7 400 aa21.56■■□□□ 1.04
CHD7-204ENST00000526846 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
CHD7-204ENST00000526846 C4BP0C0L5 1744 aa21.55■■□□□ 1.04
CHD7-204ENST00000526846 COL5A3P25940 1745 aaPredicted RBP21.55■■□□□ 1.04
CHD7-204ENST00000526846 UBR3Q6ZT12 1888 aa21.55■■□□□ 1.04
CHD7-204ENST00000526846 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
CHD7-204ENST00000526846 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
CHD7-204ENST00000526846 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
CHD7-204ENST00000526846 CCNL1Q9UK58 526 aaPredicted RBP21.54■■□□□ 1.04
CHD7-204ENST00000526846 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
CHD7-204ENST00000526846 SMARCC1Q92922 1105 aaPredicted RBP21.53■■□□□ 1.04
CHD7-204ENST00000526846 PDGFDQ9GZP0 370 aaPredicted RBP21.53■■□□□ 1.04
CHD7-204ENST00000526846 STK32BQ9NY57 414 aa21.53■■□□□ 1.04
CHD7-204ENST00000526846 ASAP1Q9ULH1 1129 aa21.53■■□□□ 1.04
CHD7-204ENST00000526846 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms