RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
PACS1-202ENST00000524784 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
PACS1-202ENST00000524784 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
PACS1-202ENST00000524784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.2
PACS1-202ENST00000524784 IL16Q14005 1332 aa13.8□□□□□ -0.2
PACS1-202ENST00000524784 CRB1P82279 1406 aa13.8□□□□□ -0.2
PACS1-202ENST00000524784 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
PACS1-202ENST00000524784 IL2RBP14784 551 aa13.79□□□□□ -0.2
PACS1-202ENST00000524784 ZNF530Q6P9A1 599 aaPredicted RBP13.79□□□□□ -0.2
PACS1-202ENST00000524784 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
PACS1-202ENST00000524784 PLEKHG2Q9H7P9 1386 aa13.79□□□□□ -0.2
PACS1-202ENST00000524784 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
PACS1-202ENST00000524784 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
PACS1-202ENST00000524784 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
PACS1-202ENST00000524784 GNAI1P63096 354 aa13.77□□□□□ -0.21
PACS1-202ENST00000524784 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
PACS1-202ENST00000524784 DUSP27Q5VZP5 1158 aa13.77□□□□□ -0.21
PACS1-202ENST00000524784 MCM10Q7L590 875 aa13.77□□□□□ -0.21
PACS1-202ENST00000524784 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.21
PACS1-202ENST00000524784 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.21
PACS1-202ENST00000524784 THUMPD2Q9BTF0 503 aaKnown RBP13.77□□□□□ -0.21
PACS1-202ENST00000524784 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.21
PACS1-202ENST00000524784 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
PACS1-202ENST00000524784 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
PACS1-202ENST00000524784 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
PACS1-202ENST00000524784 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
PACS1-202ENST00000524784 SLIT2O94813 1529 aa13.75□□□□□ -0.21
PACS1-202ENST00000524784 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
PACS1-202ENST00000524784 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
PACS1-202ENST00000524784 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
PACS1-202ENST00000524784 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
PACS1-202ENST00000524784 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
PACS1-202ENST00000524784 USP21Q9UK80 565 aa13.75□□□□□ -0.21
PACS1-202ENST00000524784 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
PACS1-202ENST00000524784 MEGF6O75095 1541 aa13.74□□□□□ -0.21
PACS1-202ENST00000524784 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 LRP6O75581 1613 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 PHKG2P15735 406 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 VPS72Q15906 364 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
PACS1-202ENST00000524784 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 PCDH11XQ9BZA7 1347 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 PCDH11YQ9BZA8 1340 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 EXOC5O00471 708 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
PACS1-202ENST00000524784 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
PACS1-202ENST00000524784 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
PACS1-202ENST00000524784 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 CHL1O00533 1208 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 ZNF853P0CG23 659 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 TEFQ10587 303 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.21
PACS1-202ENST00000524784 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.21
PACS1-202ENST00000524784 LGR6Q9HBX8 967 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
PACS1-202ENST00000524784 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
PACS1-202ENST00000524784 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
PACS1-202ENST00000524784 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
PACS1-202ENST00000524784 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
PACS1-202ENST00000524784 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
PACS1-202ENST00000524784 AFF2P51816 1311 aa13.69□□□□□ -0.22
PACS1-202ENST00000524784 CYP27B1O15528 508 aa13.69□□□□□ -0.22
PACS1-202ENST00000524784 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
PACS1-202ENST00000524784 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
PACS1-202ENST00000524784 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
PACS1-202ENST00000524784 NRAPQ86VF7 1730 aa13.69□□□□□ -0.22
PACS1-202ENST00000524784 PARP4Q9UKK3 1724 aaKnown RBP13.69□□□□□ -0.22
PACS1-202ENST00000524784 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
PACS1-202ENST00000524784 NEFLP07196 543 aa13.68□□□□□ -0.22
PACS1-202ENST00000524784 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
PACS1-202ENST00000524784 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
PACS1-202ENST00000524784 DDB1Q16531 1140 aa13.67□□□□□ -0.22
PACS1-202ENST00000524784 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
PACS1-202ENST00000524784 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
PACS1-202ENST00000524784 CABP4P57796 275 aa13.66□□□□□ -0.22
PACS1-202ENST00000524784 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
PACS1-202ENST00000524784 A0A0G2JS52 829 aa13.65□□□□□ -0.22
PACS1-202ENST00000524784 MYT1Q01538 1121 aa13.65□□□□□ -0.22
PACS1-202ENST00000524784 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
PACS1-202ENST00000524784 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
PACS1-202ENST00000524784 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
PACS1-202ENST00000524784 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
PACS1-202ENST00000524784 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
PACS1-202ENST00000524784 TWISTNBQ3B726 338 aaPredicted RBP13.64□□□□□ -0.23
PACS1-202ENST00000524784 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
PACS1-202ENST00000524784 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
PACS1-202ENST00000524784 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
PACS1-202ENST00000524784 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
PACS1-202ENST00000524784 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
PACS1-202ENST00000524784 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
PACS1-202ENST00000524784 KDM6AO15550 1401 aaPredicted RBP13.63□□□□□ -0.23
PACS1-202ENST00000524784 VAMP4O75379 141 aa13.62□□□□□ -0.23
PACS1-202ENST00000524784 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms