RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
MMP3-203ENST00000524478 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
MMP3-203ENST00000524478 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
MMP3-203ENST00000524478 ADCY9O60503 1353 aa13.62□□□□□ -0.23
MMP3-203ENST00000524478 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
MMP3-203ENST00000524478 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
MMP3-203ENST00000524478 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
MMP3-203ENST00000524478 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
MMP3-203ENST00000524478 ANKRD36BQ8N2N9 1353 aa13.61□□□□□ -0.23
MMP3-203ENST00000524478 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
MMP3-203ENST00000524478 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
MMP3-203ENST00000524478 POLD1P28340 1107 aa13.6□□□□□ -0.23
MMP3-203ENST00000524478 ITGB4P16144 1822 aa13.59□□□□□ -0.23
MMP3-203ENST00000524478 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
MMP3-203ENST00000524478 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
MMP3-203ENST00000524478 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
MMP3-203ENST00000524478 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
MMP3-203ENST00000524478 PCNTO95613 3336 aa13.57□□□□□ -0.24
MMP3-203ENST00000524478 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
MMP3-203ENST00000524478 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
MMP3-203ENST00000524478 MAP2P11137 1827 aaKnown RBP13.56□□□□□ -0.24
MMP3-203ENST00000524478 MSL1Q68DK7 614 aa13.56□□□□□ -0.24
MMP3-203ENST00000524478 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
MMP3-203ENST00000524478 COL23A1Q86Y22 540 aaPredicted RBP13.55□□□□□ -0.24
MMP3-203ENST00000524478 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
MMP3-203ENST00000524478 IP6K1Q92551 441 aa13.54□□□□□ -0.24
MMP3-203ENST00000524478 LTV1Q96GA3 475 aaPredicted RBP13.54□□□□□ -0.24
MMP3-203ENST00000524478 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
MMP3-203ENST00000524478 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
MMP3-203ENST00000524478 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
MMP3-203ENST00000524478 SIN3AQ96ST3 1273 aa13.53□□□□□ -0.24
MMP3-203ENST00000524478 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
MMP3-203ENST00000524478 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
MMP3-203ENST00000524478 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
MMP3-203ENST00000524478 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
MMP3-203ENST00000524478 RTL1A6NKG5 1358 aa13.51□□□□□ -0.25
MMP3-203ENST00000524478 HOXC9P31274 260 aa13.51□□□□□ -0.25
MMP3-203ENST00000524478 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
MMP3-203ENST00000524478 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
MMP3-203ENST00000524478 USP47Q96K76 1375 aa13.5□□□□□ -0.25
MMP3-203ENST00000524478 FBLN1P23142 703 aa13.5□□□□□ -0.25
MMP3-203ENST00000524478 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
MMP3-203ENST00000524478 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
MMP3-203ENST00000524478 HSPA6P17066 643 aa13.49□□□□□ -0.25
MMP3-203ENST00000524478 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
MMP3-203ENST00000524478 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
MMP3-203ENST00000524478 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
MMP3-203ENST00000524478 N4BP2Q86UW6 1770 aaPredicted RBP13.49□□□□□ -0.25
MMP3-203ENST00000524478 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
MMP3-203ENST00000524478 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
MMP3-203ENST00000524478 GPBP1L1Q9HC44 474 aaPredicted RBP13.48□□□□□ -0.25
MMP3-203ENST00000524478 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
MMP3-203ENST00000524478 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
MMP3-203ENST00000524478 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
MMP3-203ENST00000524478 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
MMP3-203ENST00000524478 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.25
MMP3-203ENST00000524478 NBPF4Q96M43 638 aa13.46□□□□□ -0.25
MMP3-203ENST00000524478 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
MMP3-203ENST00000524478 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
MMP3-203ENST00000524478 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
MMP3-203ENST00000524478 KIF3CO14782 793 aa13.45□□□□□ -0.26
MMP3-203ENST00000524478 SMIM5Q71RC9 77 aa13.45□□□□□ -0.26
MMP3-203ENST00000524478 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
MMP3-203ENST00000524478 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
MMP3-203ENST00000524478 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
MMP3-203ENST00000524478 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
MMP3-203ENST00000524478 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
MMP3-203ENST00000524478 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
MMP3-203ENST00000524478 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
MMP3-203ENST00000524478 AMPHP49418 695 aa13.43□□□□□ -0.26
MMP3-203ENST00000524478 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
MMP3-203ENST00000524478 SMG6Q86US8 1419 aaKnown RBP13.43□□□□□ -0.26
MMP3-203ENST00000524478 COG3Q96JB2 828 aa13.43□□□□□ -0.26
MMP3-203ENST00000524478 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
MMP3-203ENST00000524478 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
MMP3-203ENST00000524478 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
MMP3-203ENST00000524478 TESK2Q96S53 571 aa13.42□□□□□ -0.26
MMP3-203ENST00000524478 CYP27B1O15528 508 aa13.41□□□□□ -0.26
MMP3-203ENST00000524478 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
MMP3-203ENST00000524478 C10orf71Q711Q0 1435 aa13.4□□□□□ -0.26
MMP3-203ENST00000524478 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
MMP3-203ENST00000524478 PHF14O94880 888 aa13.4□□□□□ -0.26
MMP3-203ENST00000524478 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
MMP3-203ENST00000524478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
MMP3-203ENST00000524478 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
MMP3-203ENST00000524478 FLAD1Q8NFF5 587 aa13.39□□□□□ -0.27
MMP3-203ENST00000524478 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
MMP3-203ENST00000524478 INSRP06213 1382 aa13.39□□□□□ -0.27
MMP3-203ENST00000524478 FLT4P35916 1363 aa13.39□□□□□ -0.27
MMP3-203ENST00000524478 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
MMP3-203ENST00000524478 KDRP35968 1356 aa13.38□□□□□ -0.27
MMP3-203ENST00000524478 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
MMP3-203ENST00000524478 AK7Q96M32 723 aa13.38□□□□□ -0.27
MMP3-203ENST00000524478 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
MMP3-203ENST00000524478 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
MMP3-203ENST00000524478 TATP17735 454 aaPredicted RBP13.36□□□□□ -0.27
MMP3-203ENST00000524478 SSFA2P28290 1259 aa13.36□□□□□ -0.27
MMP3-203ENST00000524478 PIGBQ92521 554 aa13.36□□□□□ -0.27
MMP3-203ENST00000524478 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
MMP3-203ENST00000524478 FYB1O15117 783 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms