RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
LDLRAD3-202ENST00000524419 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
LDLRAD3-202ENST00000524419 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
LDLRAD3-202ENST00000524419 HOXC9P31274 260 aa17.4■□□□□ 0.38
LDLRAD3-202ENST00000524419 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
LDLRAD3-202ENST00000524419 CRB1P82279 1406 aa17.4■□□□□ 0.38
LDLRAD3-202ENST00000524419 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
LDLRAD3-202ENST00000524419 EYA1Q99502 592 aa17.4■□□□□ 0.38
LDLRAD3-202ENST00000524419 LRRC37A3O60309 1634 aa17.39■□□□□ 0.38
LDLRAD3-202ENST00000524419 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
LDLRAD3-202ENST00000524419 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
LDLRAD3-202ENST00000524419 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
LDLRAD3-202ENST00000524419 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
LDLRAD3-202ENST00000524419 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
LDLRAD3-202ENST00000524419 NFAT5O94916 1531 aa17.37■□□□□ 0.37
LDLRAD3-202ENST00000524419 ZBTB7BO15156 539 aaPredicted RBP17.36■□□□□ 0.37
LDLRAD3-202ENST00000524419 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
LDLRAD3-202ENST00000524419 FOXO3O43524 673 aa17.35■□□□□ 0.37
LDLRAD3-202ENST00000524419 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
LDLRAD3-202ENST00000524419 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
LDLRAD3-202ENST00000524419 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
LDLRAD3-202ENST00000524419 PSME1Q06323 249 aa17.34■□□□□ 0.37
LDLRAD3-202ENST00000524419 TSPYL4Q9UJ04 414 aa17.33■□□□□ 0.37
LDLRAD3-202ENST00000524419 KRT24Q2M2I5 525 aa17.33■□□□□ 0.36
LDLRAD3-202ENST00000524419 STRCQ7RTU9 1775 aa17.32■□□□□ 0.36
LDLRAD3-202ENST00000524419 NUCB1Q02818 461 aa17.32■□□□□ 0.36
LDLRAD3-202ENST00000524419 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
LDLRAD3-202ENST00000524419 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
LDLRAD3-202ENST00000524419 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
LDLRAD3-202ENST00000524419 SLC4A3P48751 1232 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 USP19O94966 1318 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 PTPRCP08575 1304 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 SEC24BO95487 1268 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 RGS12O14924 1447 aa17.31■□□□□ 0.36
LDLRAD3-202ENST00000524419 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
LDLRAD3-202ENST00000524419 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
LDLRAD3-202ENST00000524419 IP6K1Q92551 441 aa17.3■□□□□ 0.36
LDLRAD3-202ENST00000524419 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
LDLRAD3-202ENST00000524419 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
LDLRAD3-202ENST00000524419 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
LDLRAD3-202ENST00000524419 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
LDLRAD3-202ENST00000524419 SLIT3O75094 1523 aa17.28■□□□□ 0.36
LDLRAD3-202ENST00000524419 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
LDLRAD3-202ENST00000524419 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
LDLRAD3-202ENST00000524419 CACNA1FO60840 1977 aa17.27■□□□□ 0.36
LDLRAD3-202ENST00000524419 MSH6P52701 1360 aa17.27■□□□□ 0.36
LDLRAD3-202ENST00000524419 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
LDLRAD3-202ENST00000524419 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
LDLRAD3-202ENST00000524419 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
LDLRAD3-202ENST00000524419 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
LDLRAD3-202ENST00000524419 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
LDLRAD3-202ENST00000524419 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
LDLRAD3-202ENST00000524419 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
LDLRAD3-202ENST00000524419 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 BECN1Q14457 450 aa17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
LDLRAD3-202ENST00000524419 C1orf167Q5SNV9 1468 aa17.23■□□□□ 0.35
LDLRAD3-202ENST00000524419 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
LDLRAD3-202ENST00000524419 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 XPCQ01831 940 aaPredicted RBP17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
LDLRAD3-202ENST00000524419 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
LDLRAD3-202ENST00000524419 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
LDLRAD3-202ENST00000524419 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 ANKRD44Q8N8A2 993 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 GCP02774 474 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
LDLRAD3-202ENST00000524419 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 LMOD2Q6P5Q4 547 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 G2E3Q7L622 706 aa17.19■□□□□ 0.34
LDLRAD3-202ENST00000524419 MST1RQ04912 1400 aa17.18■□□□□ 0.34
LDLRAD3-202ENST00000524419 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
LDLRAD3-202ENST00000524419 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
LDLRAD3-202ENST00000524419 GSE1Q14687 1217 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 DCCP43146 1447 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 276.2 ms