RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 IL13P35225 146 aa16.95■□□□□ 0.3
VEGFA-225ENST00000523950 BAG6P46379 1132 aa16.95■□□□□ 0.3
VEGFA-225ENST00000523950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.32e-31■□□□□ 9.6
VEGFA-225ENST00000523950 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-225ENST00000523950 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
VEGFA-225ENST00000523950 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-225ENST00000523950 TRIM37O94972 964 aa16.94■□□□□ 0.3
VEGFA-225ENST00000523950 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-225ENST00000523950 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
VEGFA-225ENST00000523950 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
VEGFA-225ENST00000523950 KDRP35968 1356 aa16.93■□□□□ 0.3
VEGFA-225ENST00000523950 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
VEGFA-225ENST00000523950 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
VEGFA-225ENST00000523950 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
VEGFA-225ENST00000523950 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
VEGFA-225ENST00000523950 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
VEGFA-225ENST00000523950 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
VEGFA-225ENST00000523950 RALBP1Q15311 655 aa16.91■□□□□ 0.3
VEGFA-225ENST00000523950 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
VEGFA-225ENST00000523950 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
VEGFA-225ENST00000523950 APBA3O96018 575 aa16.89■□□□□ 0.29
VEGFA-225ENST00000523950 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
VEGFA-225ENST00000523950 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
VEGFA-225ENST00000523950 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
VEGFA-225ENST00000523950 RREB1Q92766 1687 aa16.88■□□□□ 0.29
VEGFA-225ENST00000523950 BTAF1O14981 1849 aa16.87■□□□□ 0.29
VEGFA-225ENST00000523950 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-225ENST00000523950 PLSCR1O15162 318 aa16.86■□□□□ 0.29
VEGFA-225ENST00000523950 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
VEGFA-225ENST00000523950 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
VEGFA-225ENST00000523950 CYP27B1O15528 508 aa16.85■□□□□ 0.29
VEGFA-225ENST00000523950 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-225ENST00000523950 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-225ENST00000523950 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
VEGFA-225ENST00000523950 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
VEGFA-225ENST00000523950 HSP90AB1P08238 724 aaKnown RBP16.84■□□□□ 0.29
VEGFA-225ENST00000523950 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
VEGFA-225ENST00000523950 CAMKK2Q96RR4 588 aa16.84■□□□□ 0.29
VEGFA-225ENST00000523950 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
VEGFA-225ENST00000523950 PHKG2P15735 406 aa16.83■□□□□ 0.28
VEGFA-225ENST00000523950 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
VEGFA-225ENST00000523950 ITGB4P16144 1822 aa16.82■□□□□ 0.28
VEGFA-225ENST00000523950 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
VEGFA-225ENST00000523950 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
VEGFA-225ENST00000523950 KCNQ2O43526 872 aa16.82■□□□□ 0.28
VEGFA-225ENST00000523950 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
VEGFA-225ENST00000523950 HMOX1P09601 288 aa16.81■□□□□ 0.28
VEGFA-225ENST00000523950 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
VEGFA-225ENST00000523950 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
VEGFA-225ENST00000523950 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
VEGFA-225ENST00000523950 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-225ENST00000523950 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-225ENST00000523950 LY75O60449 1722 aa16.79■□□□□ 0.28
VEGFA-225ENST00000523950 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-225ENST00000523950 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
VEGFA-225ENST00000523950 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
VEGFA-225ENST00000523950 FCHSD2O94868 740 aa16.77■□□□□ 0.28
VEGFA-225ENST00000523950 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-225ENST00000523950 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.28
VEGFA-225ENST00000523950 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
VEGFA-225ENST00000523950 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
VEGFA-225ENST00000523950 ADAMTS7Q9UKP4 1686 aa16.76■□□□□ 0.27
VEGFA-225ENST00000523950 VIRMAQ69YN4 1812 aaKnown RBP16.76■□□□□ 0.27
VEGFA-225ENST00000523950 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
VEGFA-225ENST00000523950 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
VEGFA-225ENST00000523950 HMGB2P26583 209 aaKnown RBP16.75■□□□□ 0.27
VEGFA-225ENST00000523950 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
VEGFA-225ENST00000523950 SLC27A3Q5K4L6 730 aa16.75■□□□□ 0.27
VEGFA-225ENST00000523950 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
VEGFA-225ENST00000523950 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-225ENST00000523950 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
VEGFA-225ENST00000523950 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
VEGFA-225ENST00000523950 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-225ENST00000523950 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
VEGFA-225ENST00000523950 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
VEGFA-225ENST00000523950 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
VEGFA-225ENST00000523950 PROM2Q8N271 834 aa16.73■□□□□ 0.27
VEGFA-225ENST00000523950 PAPPAQ13219 1627 aa16.73■□□□□ 0.27
VEGFA-225ENST00000523950 NEFMP07197 916 aa16.72■□□□□ 0.27
VEGFA-225ENST00000523950 MRC1P22897 1456 aa16.72■□□□□ 0.27
VEGFA-225ENST00000523950 PIGBQ92521 554 aa16.71■□□□□ 0.27
VEGFA-225ENST00000523950 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
VEGFA-225ENST00000523950 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
VEGFA-225ENST00000523950 ANP32CO43423 234 aa16.7■□□□□ 0.26
VEGFA-225ENST00000523950 CABP4P57796 275 aa16.7■□□□□ 0.26
VEGFA-225ENST00000523950 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
VEGFA-225ENST00000523950 QSER1Q2KHR3 1735 aa16.68■□□□□ 0.26
VEGFA-225ENST00000523950 GNAT3A8MTJ3 354 aa16.68■□□□□ 0.26
VEGFA-225ENST00000523950 RNMTO43148 476 aaKnown RBP16.68■□□□□ 0.26
VEGFA-225ENST00000523950 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
VEGFA-225ENST00000523950 C5P01031 1676 aa16.68■□□□□ 0.26
VEGFA-225ENST00000523950 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
VEGFA-225ENST00000523950 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
VEGFA-225ENST00000523950 CCNL1Q9UK58 526 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-225ENST00000523950 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.268e-10■□□□□ 9.2
VEGFA-225ENST00000523950 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
VEGFA-225ENST00000523950 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
VEGFA-225ENST00000523950 LRRC4BQ9NT99 713 aa16.66■□□□□ 0.26
VEGFA-225ENST00000523950 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-225ENST00000523950 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms