RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
LAMA4-220ENST00000523765 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
LAMA4-220ENST00000523765 PCNTO95613 3336 aa14.15□□□□□ -0.14
LAMA4-220ENST00000523765 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.15
LAMA4-220ENST00000523765 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
LAMA4-220ENST00000523765 GRIN3BO60391 1043 aa14.13□□□□□ -0.15
LAMA4-220ENST00000523765 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
LAMA4-220ENST00000523765 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
LAMA4-220ENST00000523765 NSD2O96028 1365 aa14.11□□□□□ -0.15
LAMA4-220ENST00000523765 IL2RBP14784 551 aa14.11□□□□□ -0.15
LAMA4-220ENST00000523765 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
LAMA4-220ENST00000523765 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
LAMA4-220ENST00000523765 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
LAMA4-220ENST00000523765 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
LAMA4-220ENST00000523765 ERBB3P21860 1342 aa14.11□□□□□ -0.15
LAMA4-220ENST00000523765 KIF3CO14782 793 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 DNAJC5GQ8N7S2 189 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 STAC3Q96MF2 364 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 MON2Q7Z3U7 1717 aa14.1□□□□□ -0.15
LAMA4-220ENST00000523765 TRIM26Q12899 539 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-220ENST00000523765 SLC27A3Q5K4L6 730 aa14.09□□□□□ -0.15
LAMA4-220ENST00000523765 RGPD2P0DJD1 1756 aa14.09□□□□□ -0.15
LAMA4-220ENST00000523765 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
LAMA4-220ENST00000523765 C5P01031 1676 aa14.07□□□□□ -0.16
LAMA4-220ENST00000523765 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
LAMA4-220ENST00000523765 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
LAMA4-220ENST00000523765 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
LAMA4-220ENST00000523765 COL13A1Q5TAT6 717 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-220ENST00000523765 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-220ENST00000523765 WDR90Q96KV7 1748 aa14.06□□□□□ -0.16
LAMA4-220ENST00000523765 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
LAMA4-220ENST00000523765 FAM208AQ9UK61 1670 aaKnown RBP14.05□□□□□ -0.16
LAMA4-220ENST00000523765 POTEHQ6S545 545 aa14.05□□□□□ -0.16
LAMA4-220ENST00000523765 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
LAMA4-220ENST00000523765 TTC21AQ8NDW8 1320 aa14.05□□□□□ -0.16
LAMA4-220ENST00000523765 SMIM5Q71RC9 77 aa14.04□□□□□ -0.16
LAMA4-220ENST00000523765 AMIGO3Q86WK7 504 aa14.04□□□□□ -0.16
LAMA4-220ENST00000523765 ANKRD36BQ8N2N9 1353 aa14.04□□□□□ -0.16
LAMA4-220ENST00000523765 HTRA3P83110 453 aa14.03□□□□□ -0.16
LAMA4-220ENST00000523765 NME9Q86XW9 330 aa14.03□□□□□ -0.16
LAMA4-220ENST00000523765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.16
LAMA4-220ENST00000523765 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
LAMA4-220ENST00000523765 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
LAMA4-220ENST00000523765 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.16
LAMA4-220ENST00000523765 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
LAMA4-220ENST00000523765 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
LAMA4-220ENST00000523765 USP31Q70CQ4 1352 aa14.01□□□□□ -0.17
LAMA4-220ENST00000523765 IGSF1Q8N6C5 1336 aa14.01□□□□□ -0.17
LAMA4-220ENST00000523765 APLP1P51693 650 aa14.01□□□□□ -0.17
LAMA4-220ENST00000523765 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
LAMA4-220ENST00000523765 PCGF6Q9BYE7 350 aa14.01□□□□□ -0.17
LAMA4-220ENST00000523765 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
LAMA4-220ENST00000523765 EVC2Q86UK5 1308 aa14□□□□□ -0.17
LAMA4-220ENST00000523765 MEGF6O75095 1541 aa14□□□□□ -0.17
LAMA4-220ENST00000523765 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
LAMA4-220ENST00000523765 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
LAMA4-220ENST00000523765 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
LAMA4-220ENST00000523765 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
LAMA4-220ENST00000523765 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
LAMA4-220ENST00000523765 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
LAMA4-220ENST00000523765 FBLN1P23142 703 aa13.96□□□□□ -0.17
LAMA4-220ENST00000523765 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
LAMA4-220ENST00000523765 TOMM70O94826 608 aa13.95□□□□□ -0.18
LAMA4-220ENST00000523765 USP47Q96K76 1375 aa13.95□□□□□ -0.18
LAMA4-220ENST00000523765 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
LAMA4-220ENST00000523765 ITGB4P16144 1822 aa13.94□□□□□ -0.18
LAMA4-220ENST00000523765 KIF13BQ9NQT8 1826 aa13.93□□□□□ -0.18
LAMA4-220ENST00000523765 IP6K1Q92551 441 aa13.93□□□□□ -0.18
LAMA4-220ENST00000523765 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
LAMA4-220ENST00000523765 PHF14O94880 888 aa13.92□□□□□ -0.18
LAMA4-220ENST00000523765 TNS4Q8IZW8 715 aa13.92□□□□□ -0.18
LAMA4-220ENST00000523765 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
LAMA4-220ENST00000523765 PXDNLA1KZ92 1463 aa13.92□□□□□ -0.18
LAMA4-220ENST00000523765 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
LAMA4-220ENST00000523765 PRELPP51888 382 aa13.91□□□□□ -0.18
LAMA4-220ENST00000523765 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
LAMA4-220ENST00000523765 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
LAMA4-220ENST00000523765 BRCA1P38398 1863 aaKnown RBP13.91□□□□□ -0.18
LAMA4-220ENST00000523765 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
LAMA4-220ENST00000523765 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
LAMA4-220ENST00000523765 A0A1W2PP64 1363 aa13.88□□□□□ -0.19
LAMA4-220ENST00000523765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
LAMA4-220ENST00000523765 HOXC9P31274 260 aa13.88□□□□□ -0.19
LAMA4-220ENST00000523765 NBPF6Q5VWK0 638 aa13.88□□□□□ -0.19
LAMA4-220ENST00000523765 NBPF4Q96M43 638 aa13.88□□□□□ -0.19
LAMA4-220ENST00000523765 SLC12A5Q9H2X9 1139 aa13.88□□□□□ -0.19
LAMA4-220ENST00000523765 EDC4Q6P2E9 1401 aaKnown RBP13.88□□□□□ -0.19
LAMA4-220ENST00000523765 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
LAMA4-220ENST00000523765 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
LAMA4-220ENST00000523765 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
LAMA4-220ENST00000523765 KCPQ6ZWJ8 1503 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 A0A0G2JLW4 131 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 TMC1Q8TDI8 760 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 AK7Q96M32 723 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
LAMA4-220ENST00000523765 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
LAMA4-220ENST00000523765 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms