RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 CARD10Q9BWT7 1032 aa19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 SPATA31A6Q5VVP1 1343 aa19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 GNAT3A8MTJ3 354 aa19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 LARP1Q6PKG0 1096 aaKnown RBP19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 MAP3K5Q99683 1374 aa19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
HMBOX1-210ENST00000523613 CRB1P82279 1406 aa19.6■□□□□ 0.73
HMBOX1-210ENST00000523613 DCTN1Q14203 1278 aa19.6■□□□□ 0.73
HMBOX1-210ENST00000523613 PLCH1Q4KWH8 1693 aa19.6■□□□□ 0.73
HMBOX1-210ENST00000523613 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
HMBOX1-210ENST00000523613 MCM10Q7L590 875 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 SUPT16HQ9Y5B9 1047 aaKnown RBP19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 MEGF6O75095 1541 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 GNAI1P63096 354 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 IFT57Q9NWB7 429 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 LAS1LQ9Y4W2 734 aaKnown RBP19.59■□□□□ 0.73
HMBOX1-210ENST00000523613 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
HMBOX1-210ENST00000523613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.724e-7■■□□□ 12.6
HMBOX1-210ENST00000523613 FANCIQ9NVI1 1328 aa19.57■□□□□ 0.72
HMBOX1-210ENST00000523613 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-210ENST00000523613 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-210ENST00000523613 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
HMBOX1-210ENST00000523613 IL2RBP14784 551 aa19.55■□□□□ 0.72
HMBOX1-210ENST00000523613 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
HMBOX1-210ENST00000523613 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
HMBOX1-210ENST00000523613 NEFLP07196 543 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 SLIT2O94813 1529 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 NRAPQ86VF7 1730 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 C8orf37Q96NL8 207 aa19.54■□□□□ 0.72
HMBOX1-210ENST00000523613 PKD1L3Q7Z443 1732 aa19.53■□□□□ 0.72
HMBOX1-210ENST00000523613 NGLY1Q96IV0 654 aa19.53■□□□□ 0.72
HMBOX1-210ENST00000523613 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
HMBOX1-210ENST00000523613 LRRC37A3O60309 1634 aa19.52■□□□□ 0.72
HMBOX1-210ENST00000523613 LRP6O75581 1613 aa19.52■□□□□ 0.72
HMBOX1-210ENST00000523613 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
HMBOX1-210ENST00000523613 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
HMBOX1-210ENST00000523613 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 CEMIPQ8WUJ3 1361 aa19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 CHL1O00533 1208 aa19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 EXOSC9Q06265 439 aaKnown RBP19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 IFNL2Q8IZJ0 200 aa19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 ZCRB1Q8TBF4 217 aaKnown RBP19.51■□□□□ 0.71
HMBOX1-210ENST00000523613 CT47B1P0C2W7 299 aaPredicted RBP19.5■□□□□ 0.71
HMBOX1-210ENST00000523613 PHKG2P15735 406 aa19.5■□□□□ 0.71
HMBOX1-210ENST00000523613 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
HMBOX1-210ENST00000523613 UNC5CLQ8IV45 518 aa19.49■□□□□ 0.71
HMBOX1-210ENST00000523613 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
HMBOX1-210ENST00000523613 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
HMBOX1-210ENST00000523613 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 RNF123Q5XPI4 1314 aa19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 TEFQ10587 303 aa19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
HMBOX1-210ENST00000523613 SPATA31A1Q5TZJ5 1347 aa19.47■□□□□ 0.71
HMBOX1-210ENST00000523613 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
HMBOX1-210ENST00000523613 BABAM1Q9NWV8 329 aa19.47■□□□□ 0.71
HMBOX1-210ENST00000523613 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
HMBOX1-210ENST00000523613 CYP27B1O15528 508 aa19.46■□□□□ 0.71
HMBOX1-210ENST00000523613 CDCA7Q9BWT1 371 aaPredicted RBP19.46■□□□□ 0.71
HMBOX1-210ENST00000523613 SPATA31A5Q5VU36 1347 aa19.46■□□□□ 0.71
HMBOX1-210ENST00000523613 SPATA31A7Q8IWB4 1347 aa19.46■□□□□ 0.71
HMBOX1-210ENST00000523613 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
HMBOX1-210ENST00000523613 DCAF5Q96JK2 942 aa19.45■□□□□ 0.7
HMBOX1-210ENST00000523613 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
HMBOX1-210ENST00000523613 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
HMBOX1-210ENST00000523613 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
HMBOX1-210ENST00000523613 USP21Q9UK80 565 aa19.44■□□□□ 0.7
HMBOX1-210ENST00000523613 WNK3Q9BYP7 1800 aa19.44■□□□□ 0.7
HMBOX1-210ENST00000523613 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
HMBOX1-210ENST00000523613 FKBP8Q14318 412 aa19.43■□□□□ 0.7
HMBOX1-210ENST00000523613 VPS72Q15906 364 aa19.43■□□□□ 0.7
HMBOX1-210ENST00000523613 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
HMBOX1-210ENST00000523613 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
HMBOX1-210ENST00000523613 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 SCN11AQ9UI33 1791 aa19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 TWISTNBQ3B726 338 aaPredicted RBP19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.42■□□□□ 0.7
HMBOX1-210ENST00000523613 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
HMBOX1-210ENST00000523613 EXOC5O00471 708 aa19.41■□□□□ 0.7
HMBOX1-210ENST00000523613 BARGINQ6ZT62 677 aa19.41■□□□□ 0.7
HMBOX1-210ENST00000523613 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
HMBOX1-210ENST00000523613 BTBD11A6QL63 1104 aa19.4■□□□□ 0.7
HMBOX1-210ENST00000523613 BCAR3O75815 825 aa19.4■□□□□ 0.7
HMBOX1-210ENST00000523613 IRX6P78412 446 aaPredicted RBP19.4■□□□□ 0.7
HMBOX1-210ENST00000523613 TSPYL6Q8N831 410 aa19.4■□□□□ 0.7
HMBOX1-210ENST00000523613 ELL2O00472 640 aaPredicted RBP19.39■□□□□ 0.7
HMBOX1-210ENST00000523613 VAMP4O75379 141 aa19.39■□□□□ 0.7
HMBOX1-210ENST00000523613 NKX1-1Q15270 411 aaPredicted RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms