RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.19
CD74-208ENST00000522246 CRB1P82279 1406 aa13.83□□□□□ -0.2
CD74-208ENST00000522246 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
CD74-208ENST00000522246 TRMT2AQ8IZ69 625 aaKnown RBP13.83□□□□□ -0.2
CD74-208ENST00000522246 NGLY1Q96IV0 654 aa13.83□□□□□ -0.2
CD74-208ENST00000522246 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
CD74-208ENST00000522246 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
CD74-208ENST00000522246 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
CD74-208ENST00000522246 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
CD74-208ENST00000522246 IL2RBP14784 551 aa13.81□□□□□ -0.2
CD74-208ENST00000522246 GNAI1P63096 354 aa13.81□□□□□ -0.2
CD74-208ENST00000522246 MEX3CQ5U5Q3 659 aaKnown RBP13.81□□□□□ -0.2
CD74-208ENST00000522246 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
CD74-208ENST00000522246 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
CD74-208ENST00000522246 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
CD74-208ENST00000522246 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
CD74-208ENST00000522246 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
CD74-208ENST00000522246 FBXO41Q8TF61 875 aa13.8□□□□□ -0.2
CD74-208ENST00000522246 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
CD74-208ENST00000522246 BABAM1Q9NWV8 329 aa13.8□□□□□ -0.2
CD74-208ENST00000522246 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
CD74-208ENST00000522246 SLIT2O94813 1529 aa13.8□□□□□ -0.2
CD74-208ENST00000522246 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
CD74-208ENST00000522246 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
CD74-208ENST00000522246 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
CD74-208ENST00000522246 VPS72Q15906 364 aa13.77□□□□□ -0.21
CD74-208ENST00000522246 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 OVOS2A0A0G2JMS6 1433 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 SPATA31A1Q5TZJ5 1347 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 MCM10Q7L590 875 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
CD74-208ENST00000522246 USP21Q9UK80 565 aa13.76□□□□□ -0.21
CD74-208ENST00000522246 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 EXOC5O00471 708 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 CHL1O00533 1208 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 PHKG2P15735 406 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 TAF7Q15545 349 aaPredicted RBP13.75□□□□□ -0.21
CD74-208ENST00000522246 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
CD74-208ENST00000522246 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
CD74-208ENST00000522246 PARP4Q9UKK3 1724 aaKnown RBP13.74□□□□□ -0.21
CD74-208ENST00000522246 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
CD74-208ENST00000522246 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
CD74-208ENST00000522246 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
CD74-208ENST00000522246 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
CD74-208ENST00000522246 MEGF6O75095 1541 aa13.74□□□□□ -0.21
CD74-208ENST00000522246 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 TEFQ10587 303 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
CD74-208ENST00000522246 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
CD74-208ENST00000522246 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
CD74-208ENST00000522246 LRP6O75581 1613 aa13.72□□□□□ -0.21
CD74-208ENST00000522246 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
CD74-208ENST00000522246 CYP27B1O15528 508 aa13.72□□□□□ -0.21
CD74-208ENST00000522246 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
CD74-208ENST00000522246 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
CD74-208ENST00000522246 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
CD74-208ENST00000522246 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.21
CD74-208ENST00000522246 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
CD74-208ENST00000522246 LGR6Q9HBX8 967 aa13.71□□□□□ -0.21
CD74-208ENST00000522246 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
CD74-208ENST00000522246 DISP2A7MBM2 1401 aa13.71□□□□□ -0.22
CD74-208ENST00000522246 AFF2P51816 1311 aa13.7□□□□□ -0.22
CD74-208ENST00000522246 SOS1Q07889 1333 aaPredicted RBP13.7□□□□□ -0.22
CD74-208ENST00000522246 DDB1Q16531 1140 aa13.7□□□□□ -0.22
CD74-208ENST00000522246 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
CD74-208ENST00000522246 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
CD74-208ENST00000522246 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
CD74-208ENST00000522246 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
CD74-208ENST00000522246 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
CD74-208ENST00000522246 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
CD74-208ENST00000522246 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
CD74-208ENST00000522246 BTBD11A6QL63 1104 aa13.68□□□□□ -0.22
CD74-208ENST00000522246 NEFLP07196 543 aa13.68□□□□□ -0.22
CD74-208ENST00000522246 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
CD74-208ENST00000522246 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
CD74-208ENST00000522246 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
CD74-208ENST00000522246 CABP4P57796 275 aa13.67□□□□□ -0.22
CD74-208ENST00000522246 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
CD74-208ENST00000522246 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
CD74-208ENST00000522246 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
CD74-208ENST00000522246 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
CD74-208ENST00000522246 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
CD74-208ENST00000522246 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
CD74-208ENST00000522246 ATRNO75882 1429 aa13.65□□□□□ -0.22
CD74-208ENST00000522246 VAMP4O75379 141 aa13.65□□□□□ -0.22
CD74-208ENST00000522246 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms