RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 COL16A1Q07092 1604 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-209ENST00000521977 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
SHPRH-209ENST00000521977 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
SHPRH-209ENST00000521977 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
SHPRH-209ENST00000521977 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
SHPRH-209ENST00000521977 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
SHPRH-209ENST00000521977 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
SHPRH-209ENST00000521977 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
SHPRH-209ENST00000521977 PHLPP1O60346 1717 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
SHPRH-209ENST00000521977 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
SHPRH-209ENST00000521977 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
SHPRH-209ENST00000521977 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
SHPRH-209ENST00000521977 NEFMP07197 916 aa12.51□□□□□ -0.41
SHPRH-209ENST00000521977 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
SHPRH-209ENST00000521977 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
SHPRH-209ENST00000521977 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
SHPRH-209ENST00000521977 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
SHPRH-209ENST00000521977 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
SHPRH-209ENST00000521977 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-209ENST00000521977 ERBB3P21860 1342 aa12.5□□□□□ -0.41
SHPRH-209ENST00000521977 RGPD2P0DJD1 1756 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 E9PSI1 815 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 RIPK4P57078 832 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 NBPF6Q5VWK0 638 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-209ENST00000521977 NBPF4Q96M43 638 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
SHPRH-209ENST00000521977 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
SHPRH-209ENST00000521977 IL16Q14005 1332 aa12.48□□□□□ -0.41
SHPRH-209ENST00000521977 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
SHPRH-209ENST00000521977 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
SHPRH-209ENST00000521977 PLEKHG2Q9H7P9 1386 aa12.46□□□□□ -0.41
SHPRH-209ENST00000521977 LMOD3Q0VAK6 560 aa12.46□□□□□ -0.41
SHPRH-209ENST00000521977 PRDM11Q9NQV5 511 aa12.46□□□□□ -0.41
SHPRH-209ENST00000521977 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
SHPRH-209ENST00000521977 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
SHPRH-209ENST00000521977 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
SHPRH-209ENST00000521977 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
SHPRH-209ENST00000521977 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
SHPRH-209ENST00000521977 COL5A2P05997 1499 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-209ENST00000521977 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
SHPRH-209ENST00000521977 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-209ENST00000521977 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
SHPRH-209ENST00000521977 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
SHPRH-209ENST00000521977 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
SHPRH-209ENST00000521977 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
SHPRH-209ENST00000521977 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
SHPRH-209ENST00000521977 WDR17Q8IZU2 1322 aa12.42□□□□□ -0.42
SHPRH-209ENST00000521977 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
SHPRH-209ENST00000521977 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
SHPRH-209ENST00000521977 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
SHPRH-209ENST00000521977 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
SHPRH-209ENST00000521977 LRRC37A3O60309 1634 aa12.41□□□□□ -0.42
SHPRH-209ENST00000521977 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
SHPRH-209ENST00000521977 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
SHPRH-209ENST00000521977 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
SHPRH-209ENST00000521977 CRB1P82279 1406 aa12.4□□□□□ -0.42
SHPRH-209ENST00000521977 IFT57Q9NWB7 429 aa12.4□□□□□ -0.42
SHPRH-209ENST00000521977 NLRP2Q9NX02 1062 aa12.4□□□□□ -0.42
SHPRH-209ENST00000521977 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
SHPRH-209ENST00000521977 JCADQ9P266 1359 aa12.4□□□□□ -0.42
SHPRH-209ENST00000521977 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 MEGF6O75095 1541 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 NUBP1P53384 320 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-209ENST00000521977 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
SHPRH-209ENST00000521977 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
SHPRH-209ENST00000521977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.435e-7■■■■□ 22.2
SHPRH-209ENST00000521977 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
SHPRH-209ENST00000521977 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-209ENST00000521977 GNAI1P63096 354 aa12.38□□□□□ -0.43
SHPRH-209ENST00000521977 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
SHPRH-209ENST00000521977 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
SHPRH-209ENST00000521977 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
SHPRH-209ENST00000521977 TATP17735 454 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-209ENST00000521977 MCM10Q7L590 875 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
SHPRH-209ENST00000521977 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
SHPRH-209ENST00000521977 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 PLCH1Q4KWH8 1693 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
SHPRH-209ENST00000521977 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
SHPRH-209ENST00000521977 CHL1O00533 1208 aa12.36□□□□□ -0.43
SHPRH-209ENST00000521977 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
SHPRH-209ENST00000521977 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms