RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	BARGIN	Q6ZT62	677 aa		7.53	□□□□□ -1.2
CDH17-205	ENST00000521491	PLEKHH1	Q9ULM0	1364 aa		7.53	□□□□□ -1.2
CDH17-205	ENST00000521491	GLI3	P10071	1580 aa		7.53	□□□□□ -1.2
CDH17-205	ENST00000521491	BRWD3	Q6RI45	1802 aa		7.52	□□□□□ -1.2
CDH17-205	ENST00000521491	LRPPRC	P42704	1394 aa	Known RBP	7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	NUDT7	P0C024	238 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	LHX8	Q68G74	356 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	TYW1B	Q6NUM6	668 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	GPR153	Q6NV75	609 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	DEFB132	Q7Z7B7	95 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	FBXW7	Q969H0	707 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	OTUD5	Q96G74	571 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	TULP4	Q9NRJ4	1543 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	TECPR2	O15040	1411 aa		7.52	□□□□□ -1.21
CDH17-205	ENST00000521491	C11orf95	C9JLR9	678 aa	Predicted RBP	7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	EN1	Q05925	392 aa	Predicted RBP	7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	CCDC125	Q86Z20	511 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	UNC5CL	Q8IV45	518 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	CABLES1	Q8TDN4	633 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	POLR3GL	Q9BT43	218 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	PCDHGA10	Q9Y5H3	936 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	SLIT2	O94813	1529 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	RGPD8	O14715	1765 aa	Predicted RBP	7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	SPATA31A3	Q5VYP0	1347 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	WASHC2A	Q641Q2	1341 aa		7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.51	□□□□□ -1.21
CDH17-205	ENST00000521491	FMN2	Q9NZ56	1722 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	CCDC7	Q96M83	1385 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	GPR37	O15354	613 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	FCHSD2	O94868	740 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	FOSB	P53539	338 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	KRT28	Q7Z3Y7	464 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	TESK2	Q96S53	571 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	ADGRB2	O60241	1585 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	KIF7	Q2M1P5	1343 aa		7.5	□□□□□ -1.21
CDH17-205	ENST00000521491	EP400	Q96L91	3159 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	USP32	Q8NFA0	1604 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	ABCC11	Q96J66	1382 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	SRCAP	Q6ZRS2	3230 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	PSD	A5PKW4	1024 aa	Predicted RBP	7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	MAP3K7	O43318	606 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	PRIM1	P49642	420 aa	Known RBP	7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	HIC1	Q14526	733 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	SEPT12	Q8IYM1	358 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	PRAM1	Q96QH2	718 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	SLC24A3	Q9HC58	644 aa		7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	BLM	P54132	1417 aa	Predicted RBP	7.49	□□□□□ -1.21
CDH17-205	ENST00000521491	SBNO2	Q9Y2G9	1366 aa		7.48	□□□□□ -1.21
CDH17-205	ENST00000521491	ZNF454	Q8N9F8	522 aa		7.48	□□□□□ -1.21
CDH17-205	ENST00000521491	KRI1	Q8N9T8	703 aa	Known RBP	7.48	□□□□□ -1.21
CDH17-205	ENST00000521491	POGK	Q9P215	609 aa		7.48	□□□□□ -1.21
CDH17-205	ENST00000521491	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.48	□□□□□ -1.21
CDH17-205	ENST00000521491	KIF1A	Q12756	1690 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	PLCH1	Q4KWH8	1693 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	TOPAZ1	Q8N9V7	1692 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	ITSN1	Q15811	1721 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	GNPAT	O15228	680 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	HOXB1	P14653	301 aa	Predicted RBP	7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	TMF1	P82094	1093 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	DDX10	Q13206	875 aa	Known RBP	7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	PTGDR	Q13258	359 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	VPS72	Q15906	364 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	ZDHHC16	Q969W1	377 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	CCDC9	Q9Y3X0	531 aa	Known RBP	7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	ABCA3	Q99758	1704 aa		7.47	□□□□□ -1.21
CDH17-205	ENST00000521491	FAM83G	A6ND36	823 aa		7.46	□□□□□ -1.22
CDH17-205	ENST00000521491	ONECUT3	O60422	494 aa	Predicted RBP	7.46	□□□□□ -1.22
CDH17-205	ENST00000521491	AK7	Q96M32	723 aa		7.46	□□□□□ -1.22
CDH17-205	ENST00000521491	TNS3	Q68CZ2	1445 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	NWD2	Q9ULI1	1742 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	PPP4R3B	Q5MIZ7	849 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	FAM182B	Q5T319	152 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	DIEXF	Q68CQ4	756 aa	Known RBP	7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	KRT27	Q7Z3Y8	459 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	PMFBP1	Q8TBY8	1022 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	LHX6	Q9UPM6	363 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	AKAP12	Q02952	1782 aa		7.45	□□□□□ -1.22
CDH17-205	ENST00000521491	PSME1	Q06323	249 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	MAP2K5	Q13163	448 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	SF3B2	Q13435	895 aa	Known RBP	7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	FAM98C	Q17RN3	349 aa	Known RBP	7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	SIRT1	Q96EB6	747 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	CDHR5	Q9HBB8	845 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	EVC2	Q86UK5	1308 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	SBNO1	A3KN83	1393 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	NRAP	Q86VF7	1730 aa		7.44	□□□□□ -1.22
CDH17-205	ENST00000521491	ATP7B	P35670	1465 aa		7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	KIF20B	Q96Q89	1820 aa		7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	LRP5	O75197	1615 aa		7.43	□□□□□ -1.22
CDH17-205	ENST00000521491		A0A0G2JS52	829 aa		7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	SRPK2	P78362	688 aa	Known RBP	7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	TSR1	Q2NL82	804 aa	Known RBP	7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	MON2	Q7Z3U7	1717 aa		7.43	□□□□□ -1.22
CDH17-205	ENST00000521491	TRPM3	Q9HCF6	1732 aa	Predicted RBP	7.42	□□□□□ -1.22
CDH17-205	ENST00000521491	CDCA8	Q53HL2	280 aa		7.42	□□□□□ -1.22
CDH17-205	ENST00000521491	C6orf132	Q5T0Z8	1188 aa		7.42	□□□□□ -1.22
CDH17-205	ENST00000521491	CDK19	Q9BWU1	502 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms