RNA–Protein interactions for RNA: ENST00000521175.1

MCPH1-205, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-205ENST00000521175 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
MCPH1-205ENST00000521175 FBLN1P23142 703 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 AMPHP49418 695 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 TMF1P82094 1093 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 IP6K1Q92551 441 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 STK32BQ9NY57 414 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 ANKRD36BQ8N2N9 1353 aa17.49■□□□□ 0.39
MCPH1-205ENST00000521175 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
MCPH1-205ENST00000521175 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
MCPH1-205ENST00000521175 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
MCPH1-205ENST00000521175 BTAF1O14981 1849 aa17.47■□□□□ 0.39
MCPH1-205ENST00000521175 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
MCPH1-205ENST00000521175 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
MCPH1-205ENST00000521175 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
MCPH1-205ENST00000521175 HOXC9P31274 260 aa17.46■□□□□ 0.39
MCPH1-205ENST00000521175 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
MCPH1-205ENST00000521175 KIF20BQ96Q89 1820 aa17.45■□□□□ 0.38
MCPH1-205ENST00000521175 RRS1Q15050 365 aaKnown RBP17.45■□□□□ 0.38
MCPH1-205ENST00000521175 SSUH2Q9Y2M2 353 aa17.44■□□□□ 0.38
MCPH1-205ENST00000521175 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
MCPH1-205ENST00000521175 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
MCPH1-205ENST00000521175 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
MCPH1-205ENST00000521175 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
MCPH1-205ENST00000521175 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
MCPH1-205ENST00000521175 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
MCPH1-205ENST00000521175 MYOM1P52179 1685 aa17.42■□□□□ 0.38
MCPH1-205ENST00000521175 FYB1O15117 783 aa17.41■□□□□ 0.38
MCPH1-205ENST00000521175 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
MCPH1-205ENST00000521175 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
MCPH1-205ENST00000521175 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
MCPH1-205ENST00000521175 MEGF6O75095 1541 aa17.39■□□□□ 0.37
MCPH1-205ENST00000521175 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.37
MCPH1-205ENST00000521175 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
MCPH1-205ENST00000521175 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
MCPH1-205ENST00000521175 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
MCPH1-205ENST00000521175 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
MCPH1-205ENST00000521175 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
MCPH1-205ENST00000521175 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
MCPH1-205ENST00000521175 YY1P25490 414 aa17.36■□□□□ 0.37
MCPH1-205ENST00000521175 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
MCPH1-205ENST00000521175 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
MCPH1-205ENST00000521175 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
MCPH1-205ENST00000521175 PTGER2P43116 358 aa17.35■□□□□ 0.37
MCPH1-205ENST00000521175 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
MCPH1-205ENST00000521175 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
MCPH1-205ENST00000521175 FLT4P35916 1363 aa17.34■□□□□ 0.37
MCPH1-205ENST00000521175 KCNQ4P56696 695 aa17.34■□□□□ 0.37
MCPH1-205ENST00000521175 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
MCPH1-205ENST00000521175 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
MCPH1-205ENST00000521175 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
MCPH1-205ENST00000521175 INSRP06213 1382 aa17.32■□□□□ 0.36
MCPH1-205ENST00000521175 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
MCPH1-205ENST00000521175 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
MCPH1-205ENST00000521175 SLC27A3Q5K4L6 730 aa17.31■□□□□ 0.36
MCPH1-205ENST00000521175 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
MCPH1-205ENST00000521175 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
MCPH1-205ENST00000521175 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
MCPH1-205ENST00000521175 LY75O60449 1722 aa17.3■□□□□ 0.36
MCPH1-205ENST00000521175 NSD2O96028 1365 aa17.3■□□□□ 0.36
MCPH1-205ENST00000521175 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
MCPH1-205ENST00000521175 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
MCPH1-205ENST00000521175 ARXQ96QS3 562 aa17.29■□□□□ 0.36
MCPH1-205ENST00000521175 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
MCPH1-205ENST00000521175 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
MCPH1-205ENST00000521175 QSER1Q2KHR3 1735 aa17.29■□□□□ 0.36
MCPH1-205ENST00000521175 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 SYT17Q9BSW7 474 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
MCPH1-205ENST00000521175 MAP2P11137 1827 aaKnown RBP17.27■□□□□ 0.36
MCPH1-205ENST00000521175 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
MCPH1-205ENST00000521175 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
MCPH1-205ENST00000521175 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
MCPH1-205ENST00000521175 POLD1P28340 1107 aa17.25■□□□□ 0.35
MCPH1-205ENST00000521175 TNNT2P45379 298 aaPredicted RBP17.25■□□□□ 0.35
MCPH1-205ENST00000521175 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
MCPH1-205ENST00000521175 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
MCPH1-205ENST00000521175 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
MCPH1-205ENST00000521175 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
MCPH1-205ENST00000521175 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
MCPH1-205ENST00000521175 C5P01031 1676 aa17.23■□□□□ 0.35
MCPH1-205ENST00000521175 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
MCPH1-205ENST00000521175 ITGB4P16144 1822 aa17.22■□□□□ 0.35
MCPH1-205ENST00000521175 CYP27B1O15528 508 aa17.22■□□□□ 0.35
MCPH1-205ENST00000521175 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
MCPH1-205ENST00000521175 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
MCPH1-205ENST00000521175 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
MCPH1-205ENST00000521175 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
MCPH1-205ENST00000521175 EYA1Q99502 592 aa17.2■□□□□ 0.34
MCPH1-205ENST00000521175 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
MCPH1-205ENST00000521175 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
MCPH1-205ENST00000521175 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
MCPH1-205ENST00000521175 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
MCPH1-205ENST00000521175 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
MCPH1-205ENST00000521175 GPR162Q16538 588 aa17.18■□□□□ 0.34
MCPH1-205ENST00000521175 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
MCPH1-205ENST00000521175 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
MCPH1-205ENST00000521175 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms