RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
VPS13B-208ENST00000521037 BARGINQ6ZT62 677 aa7.05□□□□□ -1.28
VPS13B-208ENST00000521037 FAM174AQ8TBP5 190 aa7.05□□□□□ -1.28
VPS13B-208ENST00000521037 DENND4BO75064 1496 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-208ENST00000521037 UHRF1BP1Q6BDS2 1440 aa7.04□□□□□ -1.28
VPS13B-208ENST00000521037 AKNAQ7Z591 1439 aa7.04□□□□□ -1.28
VPS13B-208ENST00000521037 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-208ENST00000521037 KRI1Q8N9T8 703 aaKnown RBP7.04□□□□□ -1.28
VPS13B-208ENST00000521037 ITPKCQ96DU7 683 aa7.04□□□□□ -1.28
VPS13B-208ENST00000521037 ZFYVE16Q7Z3T8 1539 aa7.04□□□□□ -1.28
VPS13B-208ENST00000521037 HECW1Q76N89 1606 aa7.04□□□□□ -1.28
VPS13B-208ENST00000521037 TULP1O00294 542 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-208ENST00000521037 PPFIA3O75145 1194 aa7.03□□□□□ -1.28
VPS13B-208ENST00000521037 ZMYND10O75800 440 aa7.03□□□□□ -1.28
VPS13B-208ENST00000521037 ZIC2O95409 532 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-208ENST00000521037 HAP1P54257 671 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-208ENST00000521037 GIGYF2Q6Y7W6 1299 aaKnown RBP7.03□□□□□ -1.28
VPS13B-208ENST00000521037 MAP10Q9P2G4 905 aa7.03□□□□□ -1.28
VPS13B-208ENST00000521037 MAGI2Q86UL8 1455 aa7.03□□□□□ -1.28
VPS13B-208ENST00000521037 POGZQ7Z3K3 1410 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 SPTLC1O15269 473 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 HRCP23327 699 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 KRT76Q01546 638 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 NR5A1Q13285 461 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 MLECQ14165 292 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 SUZ12Q15022 739 aaKnown RBP7.02□□□□□ -1.29
VPS13B-208ENST00000521037 BEGAINQ9BUH8 593 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 TBC1D2Q9BYX2 928 aa7.02□□□□□ -1.29
VPS13B-208ENST00000521037 C3P01024 1663 aa7.01□□□□□ -1.29
VPS13B-208ENST00000521037 TCOF1Q13428 1488 aaKnown RBP7.01□□□□□ -1.29
VPS13B-208ENST00000521037 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
VPS13B-208ENST00000521037 EFCAB5A4FU69 1503 aa7.01□□□□□ -1.29
VPS13B-208ENST00000521037 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-208ENST00000521037 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
VPS13B-208ENST00000521037 CTHP32929 405 aa7□□□□□ -1.29
VPS13B-208ENST00000521037 POTEAQ6S8J7 498 aa7□□□□□ -1.29
VPS13B-208ENST00000521037 SH3RF1Q7Z6J0 888 aa7□□□□□ -1.29
VPS13B-208ENST00000521037 BCANQ96GW7 911 aa7□□□□□ -1.29
VPS13B-208ENST00000521037 C1QTNF2Q9BXJ5 285 aa7□□□□□ -1.29
VPS13B-208ENST00000521037 ATP10AO60312 1499 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 CAMSAP1Q5T5Y3 1602 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 MAN1A2O60476 641 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 PRPF38BQ5VTL8 546 aaKnown RBP6.99□□□□□ -1.29
VPS13B-208ENST00000521037 VSIG10Q8N0Z9 540 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 MEIOBQ8N635 442 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
VPS13B-208ENST00000521037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS13B-208ENST00000521037 ARID5BQ14865 1188 aa6.98□□□□□ -1.29
VPS13B-208ENST00000521037 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
VPS13B-208ENST00000521037 TRAPPC8Q9Y2L5 1435 aa6.98□□□□□ -1.29
VPS13B-208ENST00000521037 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
VPS13B-208ENST00000521037 SETD1BQ9UPS6 1966 aaKnown RBP6.97□□□□□ -1.29
VPS13B-208ENST00000521037 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
VPS13B-208ENST00000521037 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-208ENST00000521037 C9orf84Q5VXU9 1444 aa6.97□□□□□ -1.29
VPS13B-208ENST00000521037 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
VPS13B-208ENST00000521037 NUP153P49790 1475 aaKnown RBP6.97□□□□□ -1.29
VPS13B-208ENST00000521037 DIXDC1Q155Q3 683 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 BPHLQ86WA6 291 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-208ENST00000521037 PARP9Q8IXQ6 854 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 KCTD17Q8N5Z5 321 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 ZBTB3Q9H5J0 574 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
VPS13B-208ENST00000521037 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
VPS13B-208ENST00000521037 BMP2P12643 396 aa6.95□□□□□ -1.3
VPS13B-208ENST00000521037 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
VPS13B-208ENST00000521037 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
VPS13B-208ENST00000521037 PLA2R1Q13018 1463 aa6.95□□□□□ -1.3
VPS13B-208ENST00000521037 SETD1AO15047 1707 aaKnown RBP6.95□□□□□ -1.3
VPS13B-208ENST00000521037 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
VPS13B-208ENST00000521037 ZC3H15Q8WU90 426 aaKnown RBP6.94□□□□□ -1.3
VPS13B-208ENST00000521037 NANOS1Q8WY41 292 aaKnown RBP6.94□□□□□ -1.3
VPS13B-208ENST00000521037 ADAMTS8Q9UP79 889 aa6.94□□□□□ -1.3
VPS13B-208ENST00000521037 NEURL4Q96JN8 1562 aa6.94□□□□□ -1.3
VPS13B-208ENST00000521037 DIP2CQ9Y2E4 1556 aa6.94□□□□□ -1.3
VPS13B-208ENST00000521037 LILRB3O75022 631 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 PIP4K2BP78356 416 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 RASSF7Q02833 373 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 TSEN34Q9BSV6 310 aaKnown RBP6.93□□□□□ -1.3
VPS13B-208ENST00000521037 LIMD1Q9UGP4 676 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 KDM5CP41229 1560 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 VWDEQ8N2E2 1590 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
VPS13B-208ENST00000521037 GOLGA3Q08378 1498 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 AGLP35573 1532 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 TRIM66O15016 1216 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 PTSQ03393 145 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 QPCTQ16769 361 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 RNFT1Q5M7Z0 435 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 NPATQ14207 1427 aa6.92□□□□□ -1.3
VPS13B-208ENST00000521037 ABCA6Q8N139 1617 aa6.91□□□□□ -1.3
VPS13B-208ENST00000521037 ZNF142P52746 1687 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-208ENST00000521037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.91□□□□□ -1.3
VPS13B-208ENST00000521037 Q6ZVU0 165 aa6.91□□□□□ -1.3
VPS13B-208ENST00000521037 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
VPS13B-208ENST00000521037 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
VPS13B-208ENST00000521037 SHANK2Q9UPX8 1470 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms