RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MED14O60244 1454 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
CLK4-206ENST00000520878 ZNF853P0CG23 659 aa14.12□□□□□ -0.15
CLK4-206ENST00000520878 TAF7Q15545 349 aaPredicted RBP14.12□□□□□ -0.15
CLK4-206ENST00000520878 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
CLK4-206ENST00000520878 AIMP1Q12904 312 aaKnown RBP14.12□□□□□ -0.15
CLK4-206ENST00000520878 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
CLK4-206ENST00000520878 CABLES1Q8TDN4 633 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 SBNO1A3KN83 1393 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
CLK4-206ENST00000520878 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 FRAT2O75474 233 aaPredicted RBP14.11□□□□□ -0.15
CLK4-206ENST00000520878 NUCB1Q02818 461 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
CLK4-206ENST00000520878 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
CLK4-206ENST00000520878 GCP02774 474 aa14.1□□□□□ -0.15
CLK4-206ENST00000520878 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
CLK4-206ENST00000520878 RAPGEF4Q8WZA2 1011 aa14.1□□□□□ -0.15
CLK4-206ENST00000520878 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
CLK4-206ENST00000520878 CDK12Q9NYV4 1490 aaPredicted RBP14.1□□□□□ -0.15
CLK4-206ENST00000520878 FLIIQ13045 1269 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 RILPL2Q969X0 211 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 LGR6Q9HBX8 967 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 SHPRHQ149N8 1683 aa14.09□□□□□ -0.15
CLK4-206ENST00000520878 REREQ9P2R6 1566 aa14.08□□□□□ -0.16
CLK4-206ENST00000520878 GNAI2P04899 355 aa14.08□□□□□ -0.16
CLK4-206ENST00000520878 IL17REQ8NFR9 667 aa14.08□□□□□ -0.16
CLK4-206ENST00000520878 TECPR2O15040 1411 aa14.08□□□□□ -0.16
CLK4-206ENST00000520878 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
CLK4-206ENST00000520878 UBTFL1P0CB47 393 aaPredicted RBP14.07□□□□□ -0.16
CLK4-206ENST00000520878 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
CLK4-206ENST00000520878 CCT4P50991 539 aaKnown RBP14.07□□□□□ -0.16
CLK4-206ENST00000520878 IP6K1Q92551 441 aa14.07□□□□□ -0.16
CLK4-206ENST00000520878 TSHZ3Q63HK5 1081 aa14.06□□□□□ -0.16
CLK4-206ENST00000520878 GZF1Q9H116 711 aaPredicted RBP14.06□□□□□ -0.16
CLK4-206ENST00000520878 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
CLK4-206ENST00000520878 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
CLK4-206ENST00000520878 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
CLK4-206ENST00000520878 SETD1BQ9UPS6 1966 aaKnown RBP14.06□□□□□ -0.16
CLK4-206ENST00000520878 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
CLK4-206ENST00000520878 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
CLK4-206ENST00000520878 USP32Q8NFA0 1604 aa14.05□□□□□ -0.16
CLK4-206ENST00000520878 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
CLK4-206ENST00000520878 OTUD7AQ8TE49 926 aaPredicted RBP14.05□□□□□ -0.16
CLK4-206ENST00000520878 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
CLK4-206ENST00000520878 PHAXQ9H814 394 aaKnown RBP14.05□□□□□ -0.16
CLK4-206ENST00000520878 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
CLK4-206ENST00000520878 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
CLK4-206ENST00000520878 PTPRCP08575 1304 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 GNAI3P08754 354 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 SIRT2Q8IXJ6 389 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 SURF6O75683 361 aaKnown RBP14.04□□□□□ -0.16
CLK4-206ENST00000520878 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
CLK4-206ENST00000520878 PIK3R4Q99570 1358 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 KCNQ3O43525 872 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 CDC45O75419 566 aa14.04□□□□□ -0.16
CLK4-206ENST00000520878 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
CLK4-206ENST00000520878 ABCC4O15439 1325 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 C19orf44Q9H6X5 657 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 MYL6BP14649 208 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 ANKRD44Q8N8A2 993 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 MSH6P52701 1360 aa14.03□□□□□ -0.16
CLK4-206ENST00000520878 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.16
CLK4-206ENST00000520878 TBC1D9Q6ZT07 1266 aa14.02□□□□□ -0.16
CLK4-206ENST00000520878 SRCIN1Q9C0H9 1055 aa14.02□□□□□ -0.16
CLK4-206ENST00000520878 ARHGEF10O15013 1369 aa14.02□□□□□ -0.16
CLK4-206ENST00000520878 SLC39A6Q13433 755 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 CHPF2Q9P2E5 772 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
CLK4-206ENST00000520878 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
CLK4-206ENST00000520878 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
CLK4-206ENST00000520878 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
CLK4-206ENST00000520878 STRN4Q9NRL3 753 aa14.01□□□□□ -0.17
CLK4-206ENST00000520878 MAP4K4O95819 1239 aaPredicted RBP14.01□□□□□ -0.17
CLK4-206ENST00000520878 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
CLK4-206ENST00000520878 TTC5Q8N0Z6 440 aa14.01□□□□□ -0.17
CLK4-206ENST00000520878 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
CLK4-206ENST00000520878 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
CLK4-206ENST00000520878 SRGAP3O43295 1099 aa14□□□□□ -0.17
CLK4-206ENST00000520878 BRPF1P55201 1214 aaPredicted RBP14□□□□□ -0.17
CLK4-206ENST00000520878 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
CLK4-206ENST00000520878 USP19O94966 1318 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 PIP4K2AP48426 406 aaPredicted RBP13.99□□□□□ -0.17
CLK4-206ENST00000520878 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
CLK4-206ENST00000520878 USP31Q70CQ4 1352 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 EVA1CP58658 441 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 PRDM11Q9NQV5 511 aa13.99□□□□□ -0.17
CLK4-206ENST00000520878 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
CLK4-206ENST00000520878 CHMP4AQ9BY43 222 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms