RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 KIF1BO60333 1816 aa15.27■□□□□ 0.04
FAM49B-215ENST00000519824 SYNMO15061 1565 aa15.27■□□□□ 0.04
FAM49B-215ENST00000519824 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
FAM49B-215ENST00000519824 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
FAM49B-215ENST00000519824 ATP5J2-PTCD1G3V325 749 aa15.27■□□□□ 0.03
FAM49B-215ENST00000519824 GBP4Q96PP9 640 aa15.27■□□□□ 0.03
FAM49B-215ENST00000519824 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.03
FAM49B-215ENST00000519824 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.03
FAM49B-215ENST00000519824 INTS3Q68E01 1043 aaKnown RBP15.27■□□□□ 0.03
FAM49B-215ENST00000519824 TET3O43151 1660 aa15.27■□□□□ 0.03
FAM49B-215ENST00000519824 MAP3K4Q9Y6R4 1608 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 PPRC1Q5VV67 1664 aaKnown RBP15.26■□□□□ 0.03
FAM49B-215ENST00000519824 PLEKHO1Q53GL0 409 aaPredicted RBP15.26■□□□□ 0.03
FAM49B-215ENST00000519824 CWC27Q6UX04 472 aaKnown RBP15.26■□□□□ 0.03
FAM49B-215ENST00000519824 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
FAM49B-215ENST00000519824 NUCB1Q02818 461 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 CHAMP1Q96JM3 812 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 ST18O60284 1047 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 TRAK2O60296 914 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 DIAPH3Q9NSV4 1193 aa15.26■□□□□ 0.03
FAM49B-215ENST00000519824 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
FAM49B-215ENST00000519824 NBPF6Q5VWK0 638 aa15.25■□□□□ 0.03
FAM49B-215ENST00000519824 NBPF4Q96M43 638 aa15.25■□□□□ 0.03
FAM49B-215ENST00000519824 GORABQ5T7V8 394 aa15.25■□□□□ 0.03
FAM49B-215ENST00000519824 CWF19L2Q2TBE0 894 aaKnown RBP15.25■□□□□ 0.03
FAM49B-215ENST00000519824 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
FAM49B-215ENST00000519824 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
FAM49B-215ENST00000519824 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 NEO1Q92859 1461 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 TMEM2Q9UHN6 1383 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 PTMAP06454 111 aaKnown RBP15.24■□□□□ 0.03
FAM49B-215ENST00000519824 HOXC9P31274 260 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 SDSP20132 328 aa15.24■□□□□ 0.03
FAM49B-215ENST00000519824 SBNO2Q9Y2G9 1366 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 MYOM2P54296 1465 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
FAM49B-215ENST00000519824 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 NPHP1O15259 732 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 GNAI3P08754 354 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 SSFA2P28290 1259 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
FAM49B-215ENST00000519824 KLHDC4Q8TBB5 520 aa15.23■□□□□ 0.03
FAM49B-215ENST00000519824 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
FAM49B-215ENST00000519824 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 HDAC1Q13547 482 aaPredicted RBP15.22■□□□□ 0.03
FAM49B-215ENST00000519824 SMC5Q8IY18 1101 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 REC8O95072 547 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 TCEANC2Q96MN5 208 aa15.22■□□□□ 0.03
FAM49B-215ENST00000519824 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 GCP02774 474 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
FAM49B-215ENST00000519824 SIRT2Q8IXJ6 389 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 IL17REQ8NFR9 667 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 MSH6P52701 1360 aa15.21■□□□□ 0.03
FAM49B-215ENST00000519824 NUTM2BA6NNL0 878 aaPredicted RBP15.21■□□□□ 0.02
FAM49B-215ENST00000519824 NUTM2EB1AL46 878 aaPredicted RBP15.21■□□□□ 0.02
FAM49B-215ENST00000519824 CEP85Q6P2H3 762 aa15.21■□□□□ 0.02
FAM49B-215ENST00000519824 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.02
FAM49B-215ENST00000519824 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
FAM49B-215ENST00000519824 IL16Q14005 1332 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 PRPF40AO75400 957 aaKnown RBP15.2■□□□□ 0.02
FAM49B-215ENST00000519824 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
FAM49B-215ENST00000519824 MCM4P33991 863 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 STK3Q13188 491 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 CAVIN1Q6NZI2 390 aaKnown RBP15.2■□□□□ 0.02
FAM49B-215ENST00000519824 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 BOLA2Q9H3K6 86 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
FAM49B-215ENST00000519824 ABCA9Q8IUA7 1624 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 AACSQ86V21 672 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
FAM49B-215ENST00000519824 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
FAM49B-215ENST00000519824 CLASRPQ8N2M8 674 aaKnown RBP15.19■□□□□ 0.02
FAM49B-215ENST00000519824 TULP4Q9NRJ4 1543 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 TATP17735 454 aaPredicted RBP15.19■□□□□ 0.02
FAM49B-215ENST00000519824 PLEKHM2Q8IWE5 1019 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 MYD88Q99836 296 aa15.19■□□□□ 0.02
FAM49B-215ENST00000519824 CHL1O00533 1208 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 CABP4P57796 275 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 CPA1P15085 419 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 MX1P20591 662 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 AAMPQ13685 434 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 PUS7Q96PZ0 661 aaKnown RBP15.18■□□□□ 0.02
FAM49B-215ENST00000519824 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
FAM49B-215ENST00000519824 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms