RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 KCNC4Q03721 635 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 BRICD5Q6PL45 260 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
CTNNA1-218ENST00000519768 UGGT1Q9NYU2 1555 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 DEPDC5O75140 1603 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 ATP7AQ04656 1500 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 HRCP23327 699 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 MTMR2Q13614 643 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 PPP2R2DQ66LE6 453 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 ZNF516Q92618 1163 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 CFAP65Q6ZU64 1925 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 ARHGAP35Q9NRY4 1499 aa7.99□□□□□ -1.13
CTNNA1-218ENST00000519768 TMEM94Q12767 1356 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 KIF3BO15066 747 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 RXRBP28702 533 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 GPATCH8Q9UKJ3 1502 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-218ENST00000519768 INO80Q9ULG1 1556 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 QPCTQ16769 361 aa7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 CSPP1Q1MSJ5 1256 aa7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 SPSB2Q99619 263 aa7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 PZPP20742 1482 aa7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 SYNMO15061 1565 aa7.97□□□□□ -1.13
CTNNA1-218ENST00000519768 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 ADH1BP00325 375 aa7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 NUTM2DQ5VT03 806 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 JCADQ9P266 1359 aa7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 EP400Q96L91 3159 aa7.96□□□□□ -1.14
CTNNA1-218ENST00000519768 NCOA2Q15596 1464 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 FAM135AQ9P2D6 1515 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 TXNDC2Q86VQ3 553 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 WASHC2CQ9Y4E1 1318 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 DHX29Q7Z478 1369 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 CLIP1P30622 1438 aa7.95□□□□□ -1.14
CTNNA1-218ENST00000519768 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 PROSER2Q86WR7 435 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 RGS12O14924 1447 aa7.94□□□□□ -1.14
CTNNA1-218ENST00000519768 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 TLL1O43897 1013 aa7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 RFC5P40937 340 aa7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 MEX3CQ5U5Q3 659 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 FAM160A2Q8N612 972 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 NLRP1Q9C000 1473 aa7.93□□□□□ -1.14
CTNNA1-218ENST00000519768 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 KCNA6P17658 529 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 CFDP1Q9UEE9 299 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 AFF2P51816 1311 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 FMN1Q68DA7 1419 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 MBD5Q9P267 1494 aa7.92□□□□□ -1.14
CTNNA1-218ENST00000519768 SLC6A16Q9GZN6 736 aa7.91□□□□□ -1.14
CTNNA1-218ENST00000519768 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-218ENST00000519768 KIAA1107Q9UPP5 1409 aa7.91□□□□□ -1.14
CTNNA1-218ENST00000519768 SCAF11Q99590 1463 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-218ENST00000519768 ADGBQ8N7X0 1667 aa7.91□□□□□ -1.14
CTNNA1-218ENST00000519768 UBR1Q8IWV7 1749 aa7.9□□□□□ -1.14
CTNNA1-218ENST00000519768 ARHGAP23Q9P227 1491 aa7.9□□□□□ -1.14
CTNNA1-218ENST00000519768 DXOO77932 396 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-218ENST00000519768 MMP16P51512 607 aa7.9□□□□□ -1.14
CTNNA1-218ENST00000519768 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CTNNA1-218ENST00000519768 KDM5DQ9BY66 1539 aa7.89□□□□□ -1.15
CTNNA1-218ENST00000519768 UBTFP17480 764 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-218ENST00000519768 JUNDP17535 347 aa7.89□□□□□ -1.15
CTNNA1-218ENST00000519768 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
CTNNA1-218ENST00000519768 DDX17Q92841 729 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-218ENST00000519768 ERVK-7P63135 1459 aa7.88□□□□□ -1.15
CTNNA1-218ENST00000519768 SPATA31A6Q5VVP1 1343 aa7.88□□□□□ -1.15
CTNNA1-218ENST00000519768 GGCXP38435 758 aa7.88□□□□□ -1.15
CTNNA1-218ENST00000519768 CDK12Q9NYV4 1490 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 TET3O43151 1660 aa7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 S1PR4O95977 384 aa7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 LYPD8Q6UX82 237 aa7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
CTNNA1-218ENST00000519768 DIP2AQ14689 1571 aa7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 AP1G2O75843 785 aa7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 RBM6P78332 1123 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 PTPRNQ16849 979 aa7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
CTNNA1-218ENST00000519768 TSC1Q92574 1164 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms