RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
CLN8-204ENST00000519254 PLIN1O60240 522 aa18.83■□□□□ 0.61
CLN8-204ENST00000519254 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.61
CLN8-204ENST00000519254 DLG5Q8TDM6 1919 aa18.83■□□□□ 0.6
CLN8-204ENST00000519254 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CLN8-204ENST00000519254 C8orf37Q96NL8 207 aa18.82■□□□□ 0.6
CLN8-204ENST00000519254 LRP6O75581 1613 aa18.82■□□□□ 0.6
CLN8-204ENST00000519254 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
CLN8-204ENST00000519254 USP35Q9P2H5 1018 aa18.81■□□□□ 0.6
CLN8-204ENST00000519254 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
CLN8-204ENST00000519254 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
CLN8-204ENST00000519254 CRB1P82279 1406 aa18.79■□□□□ 0.6
CLN8-204ENST00000519254 MEGF6O75095 1541 aa18.79■□□□□ 0.6
CLN8-204ENST00000519254 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
CLN8-204ENST00000519254 THUMPD2Q9BTF0 503 aaKnown RBP18.79■□□□□ 0.6
CLN8-204ENST00000519254 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
CLN8-204ENST00000519254 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
CLN8-204ENST00000519254 NGLY1Q96IV0 654 aa18.78■□□□□ 0.6
CLN8-204ENST00000519254 CARD10Q9BWT7 1032 aa18.78■□□□□ 0.6
CLN8-204ENST00000519254 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
CLN8-204ENST00000519254 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
CLN8-204ENST00000519254 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
CLN8-204ENST00000519254 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
CLN8-204ENST00000519254 IL16Q14005 1332 aa18.77■□□□□ 0.59
CLN8-204ENST00000519254 NWD2Q9ULI1 1742 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 ZNF530Q6P9A1 599 aaPredicted RBP18.76■□□□□ 0.59
CLN8-204ENST00000519254 MCM10Q7L590 875 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 SLIT2O94813 1529 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 BCAR3O75815 825 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 C20orf194Q5TEA3 1177 aa18.76■□□□□ 0.59
CLN8-204ENST00000519254 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
CLN8-204ENST00000519254 MAP3K5Q99683 1374 aa18.75■□□□□ 0.59
CLN8-204ENST00000519254 PARP4Q9UKK3 1724 aaKnown RBP18.74■□□□□ 0.59
CLN8-204ENST00000519254 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
CLN8-204ENST00000519254 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
CLN8-204ENST00000519254 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
CLN8-204ENST00000519254 IL2RBP14784 551 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 CRBNQ96SW2 442 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.73■□□□□ 0.59
CLN8-204ENST00000519254 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
CLN8-204ENST00000519254 OVOS2A0A0G2JMS6 1433 aa18.72■□□□□ 0.59
CLN8-204ENST00000519254 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
CLN8-204ENST00000519254 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
CLN8-204ENST00000519254 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
CLN8-204ENST00000519254 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
CLN8-204ENST00000519254 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
CLN8-204ENST00000519254 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
CLN8-204ENST00000519254 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
CLN8-204ENST00000519254 USP21Q9UK80 565 aa18.7■□□□□ 0.58
CLN8-204ENST00000519254 FNBP4Q8N3X1 1017 aaPredicted RBP18.69■□□□□ 0.58
CLN8-204ENST00000519254 FBXO41Q8TF61 875 aa18.69■□□□□ 0.58
CLN8-204ENST00000519254 SPATA31A1Q5TZJ5 1347 aa18.69■□□□□ 0.58
CLN8-204ENST00000519254 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
CLN8-204ENST00000519254 MPRIPQ6WCQ1 1025 aa18.68■□□□□ 0.58
CLN8-204ENST00000519254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLN8-204ENST00000519254 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
CLN8-204ENST00000519254 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
CLN8-204ENST00000519254 EXOSC9Q06265 439 aaKnown RBP18.68■□□□□ 0.58
CLN8-204ENST00000519254 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
CLN8-204ENST00000519254 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
CLN8-204ENST00000519254 AFF2P51816 1311 aa18.67■□□□□ 0.58
CLN8-204ENST00000519254 CT47B1P0C2W7 299 aaPredicted RBP18.67■□□□□ 0.58
CLN8-204ENST00000519254 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
CLN8-204ENST00000519254 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 PHKG2P15735 406 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 GNAI1P63096 354 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
CLN8-204ENST00000519254 CYP27B1O15528 508 aa18.65■□□□□ 0.58
CLN8-204ENST00000519254 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
CLN8-204ENST00000519254 VPS72Q15906 364 aa18.65■□□□□ 0.58
CLN8-204ENST00000519254 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
CLN8-204ENST00000519254 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.65■□□□□ 0.58
CLN8-204ENST00000519254 ZNF853P0CG23 659 aa18.64■□□□□ 0.57
CLN8-204ENST00000519254 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
CLN8-204ENST00000519254 MBIPQ9NS73 344 aa18.64■□□□□ 0.57
CLN8-204ENST00000519254 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.57
CLN8-204ENST00000519254 SHANK3Q9BYB0 1731 aa18.64■□□□□ 0.57
CLN8-204ENST00000519254 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
CLN8-204ENST00000519254 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
CLN8-204ENST00000519254 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
CLN8-204ENST00000519254 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
CLN8-204ENST00000519254 CEMIPQ8WUJ3 1361 aa18.62■□□□□ 0.57
CLN8-204ENST00000519254 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
CLN8-204ENST00000519254 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
CLN8-204ENST00000519254 TEFQ10587 303 aa18.61■□□□□ 0.57
CLN8-204ENST00000519254 FAM98CQ17RN3 349 aaKnown RBP18.61■□□□□ 0.57
CLN8-204ENST00000519254 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
CLN8-204ENST00000519254 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
CLN8-204ENST00000519254 A0A0G2JS52 829 aa18.6■□□□□ 0.57
CLN8-204ENST00000519254 EXOC5O00471 708 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms