RNA–Protein interactions for RNA: ENST00000519148.5

TOP1MT-208, Transcript of DNA topoisomerase I mitochondrial, human

TSL 2 BASIC

Gene TOP1MT, Length 1,868 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOP1MT-208	ENST00000519148	USHBP1	Q8N6Y0	703 aa		31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	ANP32E	Q9BTT0	268 aa		31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	COG6	Q9Y2V7	657 aa		31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	EXOSC9	Q06265	439 aa	Known RBP	31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	LRRC59	Q96AG4	307 aa	Known RBP	31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	CLUAP1	Q96AJ1	413 aa		31.55	■■■□□ 2.64
TOP1MT-208	ENST00000519148	MTHFSD	Q2M296	383 aa	Known RBP	31.53	■■■□□ 2.64
TOP1MT-208	ENST00000519148	GAS2L2	Q8NHY3	880 aa		31.53	■■■□□ 2.64
TOP1MT-208	ENST00000519148	BACH2	Q9BYV9	841 aa		31.52	■■■□□ 2.64
TOP1MT-208	ENST00000519148	BCL2L13	Q9BXK5	485 aa		31.52	■■■□□ 2.64
TOP1MT-208	ENST00000519148	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.52	■■■□□ 2.64
TOP1MT-208	ENST00000519148	ANP32A	P39687	249 aa	Known RBP	31.51	■■■□□ 2.63
TOP1MT-208	ENST00000519148	THUMPD2	Q9BTF0	503 aa	Known RBP	31.51	■■■□□ 2.63
TOP1MT-208	ENST00000519148	PHLPP1	O60346	1717 aa		31.5	■■■□□ 2.63
TOP1MT-208	ENST00000519148	FAM83G	A6ND36	823 aa		31.5	■■■□□ 2.63
TOP1MT-208	ENST00000519148	TOM1	O60784	492 aa		31.5	■■■□□ 2.63
TOP1MT-208	ENST00000519148	CHRNA2	Q15822	529 aa		31.5	■■■□□ 2.63
TOP1MT-208	ENST00000519148	ZKSCAN2	Q63HK3	967 aa		31.48	■■■□□ 2.63
TOP1MT-208	ENST00000519148	IFT57	Q9NWB7	429 aa		31.48	■■■□□ 2.63
TOP1MT-208	ENST00000519148	COL16A1	Q07092	1604 aa	Predicted RBP	31.48	■■■□□ 2.63
TOP1MT-208	ENST00000519148	HAP1	P54257	671 aa	Predicted RBP	31.48	■■■□□ 2.63
TOP1MT-208	ENST00000519148	PRDM11	Q9NQV5	511 aa		31.46	■■■□□ 2.63
TOP1MT-208	ENST00000519148	SMC4	Q9NTJ3	1288 aa		31.46	■■■□□ 2.63
TOP1MT-208	ENST00000519148	ZNF853	P0CG23	659 aa		31.46	■■■□□ 2.63
TOP1MT-208	ENST00000519148	GNAI1	P63096	354 aa		31.46	■■■□□ 2.63
TOP1MT-208	ENST00000519148	RLBP1	P12271	317 aa		31.45	■■■□□ 2.63
TOP1MT-208	ENST00000519148	DCTN1	Q14203	1278 aa		31.45	■■■□□ 2.63
TOP1MT-208	ENST00000519148	SKAP1	Q86WV1	359 aa		31.45	■■■□□ 2.63
TOP1MT-208	ENST00000519148	LRRC37A3	O60309	1634 aa		31.45	■■■□□ 2.62
TOP1MT-208	ENST00000519148	HTATSF1	O43719	755 aa	Known RBP	31.44	■■■□□ 2.62
TOP1MT-208	ENST00000519148	MYT1	Q01538	1121 aa		31.43	■■■□□ 2.62
TOP1MT-208	ENST00000519148	ERICH6	Q7L0X2	663 aa		31.43	■■■□□ 2.62
TOP1MT-208	ENST00000519148	CFAP44	Q96MT7	982 aa		31.43	■■■□□ 2.62
TOP1MT-208	ENST00000519148	TNN	Q9UQP3	1299 aa		31.42	■■■□□ 2.62
TOP1MT-208	ENST00000519148	MCM10	Q7L590	875 aa		31.42	■■■□□ 2.62
TOP1MT-208	ENST00000519148	SSH1	Q8WYL5	1049 aa		31.42	■■■□□ 2.62
TOP1MT-208	ENST00000519148	MAP3K5	Q99683	1374 aa		31.41	■■■□□ 2.62
TOP1MT-208	ENST00000519148	DZIP1L	Q8IYY4	767 aa	Known RBP	31.41	■■■□□ 2.62
TOP1MT-208	ENST00000519148	RTF1	Q92541	710 aa	Known RBP	31.41	■■■□□ 2.62
TOP1MT-208	ENST00000519148	ZNF428	Q96B54	188 aa		31.41	■■■□□ 2.62
TOP1MT-208	ENST00000519148	IGHD	P01880	384 aa		31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	MVP	Q14764	893 aa	Known RBP	31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	FTSJ3	Q8IY81	847 aa	Known RBP	31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	LAS1L	Q9Y4W2	734 aa	Known RBP	31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	GNAT3	A8MTJ3	354 aa		31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	ALDH1L2	Q3SY69	923 aa		31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	NLRP2	Q9NX02	1062 aa		31.4	■■■□□ 2.62
TOP1MT-208	ENST00000519148	CRB1	P82279	1406 aa		31.39	■■■□□ 2.62
TOP1MT-208	ENST00000519148	COL5A2	P05997	1499 aa	Predicted RBP	31.38	■■■□□ 2.61
TOP1MT-208	ENST00000519148	CSB-PGBD3	P0DP91	1061 aa		31.38	■■■□□ 2.61
TOP1MT-208	ENST00000519148	KIF16B	Q96L93	1317 aa		31.38	■■■□□ 2.61
TOP1MT-208	ENST00000519148	MBIP	Q9NS73	344 aa		31.38	■■■□□ 2.61
TOP1MT-208	ENST00000519148	AMOT	Q4VCS5	1084 aa		31.37	■■■□□ 2.61
TOP1MT-208	ENST00000519148	PLEKHO1	Q53GL0	409 aa	Predicted RBP	31.37	■■■□□ 2.61
TOP1MT-208	ENST00000519148	PIP4K2B	P78356	416 aa		31.36	■■■□□ 2.61
TOP1MT-208	ENST00000519148	IPO9	Q96P70	1041 aa	Known RBP	31.36	■■■□□ 2.61
TOP1MT-208	ENST00000519148	PLEKHG2	Q9H7P9	1386 aa		31.36	■■■□□ 2.61
TOP1MT-208	ENST00000519148	UBAP1L	F5GYI3	381 aa		31.35	■■■□□ 2.61
TOP1MT-208	ENST00000519148	ATF7IP	Q6VMQ6	1270 aa		31.35	■■■□□ 2.61
TOP1MT-208	ENST00000519148	COL14A1	Q05707	1796 aa	Known RBP	31.34	■■■□□ 2.61
TOP1MT-208	ENST00000519148	WDR17	Q8IZU2	1322 aa		31.34	■■■□□ 2.61
TOP1MT-208	ENST00000519148	VIRMA	Q69YN4	1812 aa	Known RBP	31.34	■■■□□ 2.61
TOP1MT-208	ENST00000519148	TRIM27	P14373	513 aa		31.33	■■■□□ 2.61
TOP1MT-208	ENST00000519148	CHL1	O00533	1208 aa		31.33	■■■□□ 2.61
TOP1MT-208	ENST00000519148	IPO8	O15397	1037 aa	Known RBP	31.33	■■■□□ 2.61
TOP1MT-208	ENST00000519148	BRPF1	P55201	1214 aa	Predicted RBP	31.31	■■■□□ 2.6
TOP1MT-208	ENST00000519148	NOP58	Q9Y2X3	529 aa	Known RBP	31.31	■■■□□ 2.6
TOP1MT-208	ENST00000519148	FAM161A	Q3B820	660 aa		31.31	■■■□□ 2.6
TOP1MT-208	ENST00000519148	RAPGEF4	Q8WZA2	1011 aa		31.31	■■■□□ 2.6
TOP1MT-208	ENST00000519148	NOB1	Q9ULX3	412 aa	Known RBP	31.31	■■■□□ 2.6
TOP1MT-208	ENST00000519148	MEGF6	O75095	1541 aa		31.3	■■■□□ 2.6
TOP1MT-208	ENST00000519148	RGS3	P49796	1198 aa		31.3	■■■□□ 2.6
TOP1MT-208	ENST00000519148	ZNF530	Q6P9A1	599 aa	Predicted RBP	31.3	■■■□□ 2.6
TOP1MT-208	ENST00000519148	PCDHB15	Q9Y5E8	787 aa		31.3	■■■□□ 2.6
TOP1MT-208	ENST00000519148	PKD1L3	Q7Z443	1732 aa		31.3	■■■□□ 2.6
TOP1MT-208	ENST00000519148	DDX19B	Q9UMR2	479 aa		31.29	■■■□□ 2.6
TOP1MT-208	ENST00000519148	AKAP4	Q5JQC9	854 aa		31.29	■■■□□ 2.6
TOP1MT-208	ENST00000519148	IL17RE	Q8NFR9	667 aa		31.29	■■■□□ 2.6
TOP1MT-208	ENST00000519148	CEMIP	Q8WUJ3	1361 aa		31.28	■■■□□ 2.6
TOP1MT-208	ENST00000519148	PARP4	Q9UKK3	1724 aa	Known RBP	31.28	■■■□□ 2.6
TOP1MT-208	ENST00000519148	RWDD1	Q9H446	243 aa	Predicted RBP	31.27	■■■□□ 2.6
TOP1MT-208	ENST00000519148	TAT	P17735	454 aa	Predicted RBP	31.27	■■■□□ 2.6
TOP1MT-208	ENST00000519148	CERK	Q8TCT0	537 aa		31.26	■■■□□ 2.59
TOP1MT-208	ENST00000519148	ADAMTS7	Q9UKP4	1686 aa		31.26	■■■□□ 2.59
TOP1MT-208	ENST00000519148	NPM2	Q86SE8	214 aa	Known RBP	31.25	■■■□□ 2.59
TOP1MT-208	ENST00000519148	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	31.25	■■■□□ 2.59	3e-6	■■■■□ 25.8
TOP1MT-208	ENST00000519148	OVOS2	A0A0G2JMS6	1433 aa		31.24	■■■□□ 2.59
TOP1MT-208	ENST00000519148	VAMP4	O75379	141 aa		31.24	■■■□□ 2.59
TOP1MT-208	ENST00000519148	C1orf141	Q5JVX7	400 aa		31.24	■■■□□ 2.59
TOP1MT-208	ENST00000519148	TOM1L2	Q6ZVM7	507 aa		31.24	■■■□□ 2.59
TOP1MT-208	ENST00000519148	ITPRIP	Q8IWB1	547 aa		31.23	■■■□□ 2.59
TOP1MT-208	ENST00000519148	C8orf34	Q49A92	452 aa		31.23	■■■□□ 2.59
TOP1MT-208	ENST00000519148	CARD10	Q9BWT7	1032 aa		31.23	■■■□□ 2.59
TOP1MT-208	ENST00000519148	TSPYL6	Q8N831	410 aa		31.22	■■■□□ 2.59
TOP1MT-208	ENST00000519148	C8orf58	Q8NAV2	365 aa		31.21	■■■□□ 2.59
TOP1MT-208	ENST00000519148	BABAM1	Q9NWV8	329 aa		31.21	■■■□□ 2.59
TOP1MT-208	ENST00000519148	PLCH1	Q4KWH8	1693 aa		31.21	■■■□□ 2.59
TOP1MT-208	ENST00000519148	TWISTNB	Q3B726	338 aa	Predicted RBP	31.21	■■■□□ 2.59
TOP1MT-208	ENST00000519148	ZBTB47	Q9UFB7	747 aa	Predicted RBP	31.21	■■■□□ 2.59
TOP1MT-208	ENST00000519148	TSPYL4	Q9UJ04	414 aa		31.21	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms