RNA–Protein interactions for RNA: ENST00000518557.5

LINC00599-202, long intergenic non-protein coding RNA 599, humanhuman

TSL 1 (best)

Gene LINC00599, Length 869 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-202ENST00000518557 POLA2Q14181 598 aa13.36□□□□□ -0.27
LINC00599-202ENST00000518557 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
LINC00599-202ENST00000518557 GGNBP2Q9H3C7 697 aa13.36□□□□□ -0.27
LINC00599-202ENST00000518557 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
LINC00599-202ENST00000518557 KCNQ2O43526 872 aa13.35□□□□□ -0.27
LINC00599-202ENST00000518557 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
LINC00599-202ENST00000518557 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
LINC00599-202ENST00000518557 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
LINC00599-202ENST00000518557 INSRP06213 1382 aa13.33□□□□□ -0.27
LINC00599-202ENST00000518557 AMPHP49418 695 aa13.33□□□□□ -0.28
LINC00599-202ENST00000518557 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
LINC00599-202ENST00000518557 MEGF6O75095 1541 aa13.33□□□□□ -0.28
LINC00599-202ENST00000518557 FLT4P35916 1363 aa13.32□□□□□ -0.28
LINC00599-202ENST00000518557 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
LINC00599-202ENST00000518557 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
LINC00599-202ENST00000518557 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
LINC00599-202ENST00000518557 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
LINC00599-202ENST00000518557 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
LINC00599-202ENST00000518557 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
LINC00599-202ENST00000518557 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
LINC00599-202ENST00000518557 NSD2O96028 1365 aa13.3□□□□□ -0.28
LINC00599-202ENST00000518557 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
LINC00599-202ENST00000518557 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00599-202ENST00000518557 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
LINC00599-202ENST00000518557 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
LINC00599-202ENST00000518557 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
LINC00599-202ENST00000518557 ANKRD26Q9UPS8 1709 aa13.28□□□□□ -0.28
LINC00599-202ENST00000518557 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
LINC00599-202ENST00000518557 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
LINC00599-202ENST00000518557 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
LINC00599-202ENST00000518557 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
LINC00599-202ENST00000518557 WASHC2AQ641Q2 1341 aa13.28□□□□□ -0.28
LINC00599-202ENST00000518557 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
LINC00599-202ENST00000518557 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
LINC00599-202ENST00000518557 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
LINC00599-202ENST00000518557 SPON1Q9HCB6 807 aa13.27□□□□□ -0.29
LINC00599-202ENST00000518557 DDX54Q8TDD1 881 aaKnown RBP13.26□□□□□ -0.29
LINC00599-202ENST00000518557 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
LINC00599-202ENST00000518557 PTGER2P43116 358 aa13.25□□□□□ -0.29
LINC00599-202ENST00000518557 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
LINC00599-202ENST00000518557 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
LINC00599-202ENST00000518557 BTAF1O14981 1849 aa13.25□□□□□ -0.29
LINC00599-202ENST00000518557 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
LINC00599-202ENST00000518557 PLEKHG2Q9H7P9 1386 aa13.24□□□□□ -0.29
LINC00599-202ENST00000518557 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
LINC00599-202ENST00000518557 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
LINC00599-202ENST00000518557 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
LINC00599-202ENST00000518557 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
LINC00599-202ENST00000518557 ZNF827Q17R98 1081 aa13.23□□□□□ -0.29
LINC00599-202ENST00000518557 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
LINC00599-202ENST00000518557 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
LINC00599-202ENST00000518557 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
LINC00599-202ENST00000518557 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
LINC00599-202ENST00000518557 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
LINC00599-202ENST00000518557 PANK3Q9H999 370 aa13.22□□□□□ -0.29
LINC00599-202ENST00000518557 CYP27B1O15528 508 aa13.21□□□□□ -0.29
LINC00599-202ENST00000518557 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
LINC00599-202ENST00000518557 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
LINC00599-202ENST00000518557 MTFR1LQ9H019 292 aa13.21□□□□□ -0.29
LINC00599-202ENST00000518557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00599-202ENST00000518557 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
LINC00599-202ENST00000518557 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
LINC00599-202ENST00000518557 EYA1Q99502 592 aa13.2□□□□□ -0.3
LINC00599-202ENST00000518557 LY75O60449 1722 aa13.19□□□□□ -0.3
LINC00599-202ENST00000518557 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
LINC00599-202ENST00000518557 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
LINC00599-202ENST00000518557 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
LINC00599-202ENST00000518557 KIF7Q2M1P5 1343 aa13.17□□□□□ -0.3
LINC00599-202ENST00000518557 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
LINC00599-202ENST00000518557 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
LINC00599-202ENST00000518557 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
LINC00599-202ENST00000518557 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
LINC00599-202ENST00000518557 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
LINC00599-202ENST00000518557 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
LINC00599-202ENST00000518557 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
LINC00599-202ENST00000518557 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
LINC00599-202ENST00000518557 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
LINC00599-202ENST00000518557 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
LINC00599-202ENST00000518557 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
LINC00599-202ENST00000518557 PPP1R1BQ9UD71 204 aaPredicted RBP13.15□□□□□ -0.3
LINC00599-202ENST00000518557 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
LINC00599-202ENST00000518557 KCNQ4P56696 695 aa13.14□□□□□ -0.31
LINC00599-202ENST00000518557 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
LINC00599-202ENST00000518557 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
LINC00599-202ENST00000518557 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
LINC00599-202ENST00000518557 KDRP35968 1356 aa13.13□□□□□ -0.31
LINC00599-202ENST00000518557 PHKG2P15735 406 aa13.13□□□□□ -0.31
LINC00599-202ENST00000518557 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
LINC00599-202ENST00000518557 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
LINC00599-202ENST00000518557 PIGBQ92521 554 aa13.12□□□□□ -0.31
LINC00599-202ENST00000518557 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
LINC00599-202ENST00000518557 HMGB2P26583 209 aaKnown RBP13.11□□□□□ -0.31
LINC00599-202ENST00000518557 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
LINC00599-202ENST00000518557 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
LINC00599-202ENST00000518557 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
LINC00599-202ENST00000518557 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
LINC00599-202ENST00000518557 ARXQ96QS3 562 aa13.11□□□□□ -0.31
LINC00599-202ENST00000518557 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
LINC00599-202ENST00000518557 KNSTRNQ9Y448 316 aa13.11□□□□□ -0.31
LINC00599-202ENST00000518557 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms