RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
PVT1-207ENST00000518528 ADCY9O60503 1353 aa12.68□□□□□ -0.38
PVT1-207ENST00000518528 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
PVT1-207ENST00000518528 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
PVT1-207ENST00000518528 AMPHP49418 695 aa12.66□□□□□ -0.38
PVT1-207ENST00000518528 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
PVT1-207ENST00000518528 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
PVT1-207ENST00000518528 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 KIF3CO14782 793 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 AK7Q96M32 723 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 NSD2O96028 1365 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
PVT1-207ENST00000518528 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
PVT1-207ENST00000518528 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
PVT1-207ENST00000518528 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
PVT1-207ENST00000518528 COG3Q96JB2 828 aa12.63□□□□□ -0.39
PVT1-207ENST00000518528 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
PVT1-207ENST00000518528 TOMM70O94826 608 aa12.62□□□□□ -0.39
PVT1-207ENST00000518528 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
PVT1-207ENST00000518528 HOXC9P31274 260 aa12.61□□□□□ -0.39
PVT1-207ENST00000518528 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
PVT1-207ENST00000518528 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
PVT1-207ENST00000518528 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
PVT1-207ENST00000518528 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
PVT1-207ENST00000518528 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
PVT1-207ENST00000518528 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
PVT1-207ENST00000518528 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
PVT1-207ENST00000518528 PHF14O94880 888 aa12.59□□□□□ -0.39
PVT1-207ENST00000518528 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
PVT1-207ENST00000518528 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
PVT1-207ENST00000518528 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
PVT1-207ENST00000518528 PCDH11XQ9BZA7 1347 aa12.59□□□□□ -0.39
PVT1-207ENST00000518528 PCDH11YQ9BZA8 1340 aa12.59□□□□□ -0.39
PVT1-207ENST00000518528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
PVT1-207ENST00000518528 SSFA2P28290 1259 aa12.58□□□□□ -0.4
PVT1-207ENST00000518528 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
PVT1-207ENST00000518528 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
PVT1-207ENST00000518528 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
PVT1-207ENST00000518528 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 MEGF6O75095 1541 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
PVT1-207ENST00000518528 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 TGFB2P61812 414 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
PVT1-207ENST00000518528 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 CAPN15O75808 1086 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 FSTL1Q12841 308 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 LY75O60449 1722 aa12.54□□□□□ -0.4
PVT1-207ENST00000518528 GNPATO15228 680 aa12.53□□□□□ -0.4
PVT1-207ENST00000518528 MMP10P09238 476 aa12.53□□□□□ -0.4
PVT1-207ENST00000518528 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
PVT1-207ENST00000518528 LTN1O94822 1766 aa12.53□□□□□ -0.4
PVT1-207ENST00000518528 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
PVT1-207ENST00000518528 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 SIK1P57059 783 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
PVT1-207ENST00000518528 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
PVT1-207ENST00000518528 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
PVT1-207ENST00000518528 FCHSD2O94868 740 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 FBLN1P23142 703 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 PRELPP51888 382 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 PIGBQ92521 554 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
PVT1-207ENST00000518528 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 CYP27B1O15528 508 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 TMF1P82094 1093 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
PVT1-207ENST00000518528 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
PVT1-207ENST00000518528 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
PVT1-207ENST00000518528 SMIM5Q71RC9 77 aa12.49□□□□□ -0.41
PVT1-207ENST00000518528 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
PVT1-207ENST00000518528 INSRP06213 1382 aa12.48□□□□□ -0.41
PVT1-207ENST00000518528 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
PVT1-207ENST00000518528 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
PVT1-207ENST00000518528 PXDNLA1KZ92 1463 aa12.47□□□□□ -0.41
PVT1-207ENST00000518528 DPEP1P16444 411 aa12.47□□□□□ -0.41
PVT1-207ENST00000518528 ADRA2BP18089 450 aa12.47□□□□□ -0.41
PVT1-207ENST00000518528 HSP90AB2PQ58FF8 381 aa12.47□□□□□ -0.41
PVT1-207ENST00000518528 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms