RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 PANK3Q9H999 370 aa16.43■□□□□ 0.22
MCM4-202ENST00000517709 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
MCM4-202ENST00000517709 EXOC5O00471 708 aa16.42■□□□□ 0.22
MCM4-202ENST00000517709 R3HDM1Q15032 1099 aaKnown RBP16.42■□□□□ 0.22
MCM4-202ENST00000517709 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
MCM4-202ENST00000517709 NSD2O96028 1365 aa16.41■□□□□ 0.22
MCM4-202ENST00000517709 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
MCM4-202ENST00000517709 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
MCM4-202ENST00000517709 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
MCM4-202ENST00000517709 PROM2Q8N271 834 aa16.39■□□□□ 0.21
MCM4-202ENST00000517709 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.21
MCM4-202ENST00000517709 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
MCM4-202ENST00000517709 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
MCM4-202ENST00000517709 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
MCM4-202ENST00000517709 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
MCM4-202ENST00000517709 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
MCM4-202ENST00000517709 DDX54Q8TDD1 881 aaKnown RBP16.36■□□□□ 0.21
MCM4-202ENST00000517709 C5P01031 1676 aa16.36■□□□□ 0.21
MCM4-202ENST00000517709 PLSCR1O15162 318 aa16.35■□□□□ 0.21
MCM4-202ENST00000517709 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
MCM4-202ENST00000517709 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
MCM4-202ENST00000517709 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
MCM4-202ENST00000517709 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
MCM4-202ENST00000517709 TXNRD1Q16881 649 aa16.32■□□□□ 0.2
MCM4-202ENST00000517709 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
MCM4-202ENST00000517709 EYA1Q99502 592 aa16.32■□□□□ 0.2
MCM4-202ENST00000517709 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
MCM4-202ENST00000517709 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
MCM4-202ENST00000517709 CYP27B1O15528 508 aa16.29■□□□□ 0.2
MCM4-202ENST00000517709 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
MCM4-202ENST00000517709 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
MCM4-202ENST00000517709 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
MCM4-202ENST00000517709 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
MCM4-202ENST00000517709 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
MCM4-202ENST00000517709 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
MCM4-202ENST00000517709 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
MCM4-202ENST00000517709 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
MCM4-202ENST00000517709 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
MCM4-202ENST00000517709 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.2
MCM4-202ENST00000517709 KCNQ4P56696 695 aa16.27■□□□□ 0.2
MCM4-202ENST00000517709 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
MCM4-202ENST00000517709 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
MCM4-202ENST00000517709 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
MCM4-202ENST00000517709 UBR3Q6ZT12 1888 aa16.26■□□□□ 0.19
MCM4-202ENST00000517709 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
MCM4-202ENST00000517709 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
MCM4-202ENST00000517709 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
MCM4-202ENST00000517709 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
MCM4-202ENST00000517709 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
MCM4-202ENST00000517709 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
MCM4-202ENST00000517709 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
MCM4-202ENST00000517709 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
MCM4-202ENST00000517709 CNGB1Q14028 1251 aaPredicted RBP16.21■□□□□ 0.19
MCM4-202ENST00000517709 KDRP35968 1356 aa16.21■□□□□ 0.19
MCM4-202ENST00000517709 TJP1Q07157 1748 aa16.2■□□□□ 0.18
MCM4-202ENST00000517709 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
MCM4-202ENST00000517709 IL13P35225 146 aa16.2■□□□□ 0.18
MCM4-202ENST00000517709 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
MCM4-202ENST00000517709 NPC1L1Q9UHC9 1359 aa16.2■□□□□ 0.18
MCM4-202ENST00000517709 ZNF831Q5JPB2 1677 aa16.19■□□□□ 0.18
MCM4-202ENST00000517709 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
MCM4-202ENST00000517709 PHKG2P15735 406 aa16.19■□□□□ 0.18
MCM4-202ENST00000517709 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
MCM4-202ENST00000517709 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
MCM4-202ENST00000517709 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
MCM4-202ENST00000517709 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
MCM4-202ENST00000517709 C4AP0C0L4 1744 aa16.17■□□□□ 0.18
MCM4-202ENST00000517709 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
MCM4-202ENST00000517709 MTHFSP49914 203 aa16.17■□□□□ 0.18
MCM4-202ENST00000517709 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
MCM4-202ENST00000517709 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
MCM4-202ENST00000517709 PTGER2P43116 358 aa16.16■□□□□ 0.18
MCM4-202ENST00000517709 PIGBQ92521 554 aa16.16■□□□□ 0.18
MCM4-202ENST00000517709 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
MCM4-202ENST00000517709 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
MCM4-202ENST00000517709 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
MCM4-202ENST00000517709 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
MCM4-202ENST00000517709 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
MCM4-202ENST00000517709 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
MCM4-202ENST00000517709 AMIGO3Q86WK7 504 aa16.15■□□□□ 0.18
MCM4-202ENST00000517709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.189e-7■□□□□ 10
MCM4-202ENST00000517709 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
MCM4-202ENST00000517709 MRC1P22897 1456 aa16.15■□□□□ 0.18
MCM4-202ENST00000517709 UTRNP46939 3433 aa16.14■□□□□ 0.17
MCM4-202ENST00000517709 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
MCM4-202ENST00000517709 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
MCM4-202ENST00000517709 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
MCM4-202ENST00000517709 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
MCM4-202ENST00000517709 HMOX1P09601 288 aa16.12■□□□□ 0.17
MCM4-202ENST00000517709 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
MCM4-202ENST00000517709 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
MCM4-202ENST00000517709 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
MCM4-202ENST00000517709 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
MCM4-202ENST00000517709 ITPK1Q13572 414 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
MCM4-202ENST00000517709 ATG3Q9NT62 314 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms