RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 EMILIN1Q9Y6C2 1016 aa15.04■□□□□ -0
TRIM55-205ENST00000517647 SBF2Q86WG5 1849 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 PLSCR1O15162 318 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 NBPF6Q5VWK0 638 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 NBPF4Q96M43 638 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 CAMKK2Q96RR4 588 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
TRIM55-205ENST00000517647 RGPD3A6NKT7 1758 aaPredicted RBP15.03■□□□□ -0
TRIM55-205ENST00000517647 RGPD4Q7Z3J3 1758 aa15.03■□□□□ -0
TRIM55-205ENST00000517647 TRIM37O94972 964 aa15.02■□□□□ -0
TRIM55-205ENST00000517647 DIEXFQ68CQ4 756 aaKnown RBP15.02■□□□□ -0
TRIM55-205ENST00000517647 MORC1Q86VD1 984 aa15□□□□□ -0.01
TRIM55-205ENST00000517647 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
TRIM55-205ENST00000517647 RGPD2P0DJD1 1756 aa15□□□□□ -0.01
TRIM55-205ENST00000517647 MEGF6O75095 1541 aa14.99□□□□□ -0.01
TRIM55-205ENST00000517647 APBA3O96018 575 aa14.99□□□□□ -0.01
TRIM55-205ENST00000517647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRIM55-205ENST00000517647 EN1Q05925 392 aaPredicted RBP14.98□□□□□ -0.01
TRIM55-205ENST00000517647 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
TRIM55-205ENST00000517647 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
TRIM55-205ENST00000517647 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
TRIM55-205ENST00000517647 EYA1Q99502 592 aa14.97□□□□□ -0.01
TRIM55-205ENST00000517647 NHSQ6T4R5 1651 aa14.97□□□□□ -0.01
TRIM55-205ENST00000517647 RREB1Q92766 1687 aa14.97□□□□□ -0.01
TRIM55-205ENST00000517647 TATP17735 454 aaPredicted RBP14.96□□□□□ -0.01
TRIM55-205ENST00000517647 EIF4A2Q14240 407 aaKnown RBP14.96□□□□□ -0.01
TRIM55-205ENST00000517647 SHANK3Q9BYB0 1731 aa14.96□□□□□ -0.01
TRIM55-205ENST00000517647 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
TRIM55-205ENST00000517647 PKD1L3Q7Z443 1732 aa14.95□□□□□ -0.02
TRIM55-205ENST00000517647 EZH2Q15910 746 aaKnown RBP14.94□□□□□ -0.02
TRIM55-205ENST00000517647 PCDH11XQ9BZA7 1347 aa14.93□□□□□ -0.02
TRIM55-205ENST00000517647 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
TRIM55-205ENST00000517647 TNNT2P45379 298 aaPredicted RBP14.93□□□□□ -0.02
TRIM55-205ENST00000517647 NKX1-1Q15270 411 aaPredicted RBP14.93□□□□□ -0.02
TRIM55-205ENST00000517647 KDRP35968 1356 aa14.93□□□□□ -0.02
TRIM55-205ENST00000517647 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
TRIM55-205ENST00000517647 IL13P35225 146 aa14.91□□□□□ -0.02
TRIM55-205ENST00000517647 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
TRIM55-205ENST00000517647 NUP188Q5SRE5 1749 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 CYP27B1O15528 508 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 KCNQ2O43526 872 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 MTHFSP49914 203 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 PROM2Q8N271 834 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 DDX54Q8TDD1 881 aaKnown RBP14.9□□□□□ -0.02
TRIM55-205ENST00000517647 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
TRIM55-205ENST00000517647 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
TRIM55-205ENST00000517647 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
TRIM55-205ENST00000517647 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
TRIM55-205ENST00000517647 CC2D1BQ5T0F9 858 aaKnown RBP14.88□□□□□ -0.03
TRIM55-205ENST00000517647 NBPF14Q5TI25 921 aa14.88□□□□□ -0.03
TRIM55-205ENST00000517647 BTAF1O14981 1849 aa14.87□□□□□ -0.03
TRIM55-205ENST00000517647 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
TRIM55-205ENST00000517647 SLC27A3Q5K4L6 730 aa14.87□□□□□ -0.03
TRIM55-205ENST00000517647 KAT6BQ8WYB5 2073 aa14.87□□□□□ -0.03
TRIM55-205ENST00000517647 ACSBG1Q96GR2 724 aa14.86□□□□□ -0.03
TRIM55-205ENST00000517647 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
TRIM55-205ENST00000517647 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
TRIM55-205ENST00000517647 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
TRIM55-205ENST00000517647 PRIM1P49642 420 aaKnown RBP14.85□□□□□ -0.03
TRIM55-205ENST00000517647 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
TRIM55-205ENST00000517647 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
TRIM55-205ENST00000517647 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
TRIM55-205ENST00000517647 HSP90AB1P08238 724 aaKnown RBP14.84□□□□□ -0.03
TRIM55-205ENST00000517647 PHKG2P15735 406 aa14.84□□□□□ -0.03
TRIM55-205ENST00000517647 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
TRIM55-205ENST00000517647 CENPBP07199 599 aaPredicted RBP14.83□□□□□ -0.04
TRIM55-205ENST00000517647 LRP5O75197 1615 aa14.83□□□□□ -0.04
TRIM55-205ENST00000517647 PAPPAQ13219 1627 aa14.83□□□□□ -0.04
TRIM55-205ENST00000517647 SULT6B1Q6IMI4 303 aa14.82□□□□□ -0.04
TRIM55-205ENST00000517647 LY75O60449 1722 aa14.82□□□□□ -0.04
TRIM55-205ENST00000517647 ERVV-2B6SEH9 535 aa14.81□□□□□ -0.04
TRIM55-205ENST00000517647 R3HDM1Q15032 1099 aaKnown RBP14.81□□□□□ -0.04
TRIM55-205ENST00000517647 DCAF5Q96JK2 942 aa14.81□□□□□ -0.04
TRIM55-205ENST00000517647 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 ABCB7O75027 752 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 PPP2R1AP30153 589 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 AEBP1Q8IUX7 1158 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 SMARCC1Q92922 1105 aaPredicted RBP14.8□□□□□ -0.04
TRIM55-205ENST00000517647 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
TRIM55-205ENST00000517647 ITGB4P16144 1822 aa14.8□□□□□ -0.04
TRIM55-205ENST00000517647 SLC15A2Q16348 729 aa14.79□□□□□ -0.04
TRIM55-205ENST00000517647 LRRC4BQ9NT99 713 aa14.79□□□□□ -0.04
TRIM55-205ENST00000517647 PSDA5PKW4 1024 aaPredicted RBP14.78□□□□□ -0.04
TRIM55-205ENST00000517647 PIGBQ92521 554 aa14.78□□□□□ -0.04
TRIM55-205ENST00000517647 SYTL4Q96C24 671 aaPredicted RBP14.78□□□□□ -0.04
TRIM55-205ENST00000517647 RALBP1Q15311 655 aa14.77□□□□□ -0.05
TRIM55-205ENST00000517647 AKAP4Q5JQC9 854 aa14.77□□□□□ -0.05
TRIM55-205ENST00000517647 ZNF530Q6P9A1 599 aaPredicted RBP14.77□□□□□ -0.05
TRIM55-205ENST00000517647 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
TRIM55-205ENST00000517647 STK32BQ9NY57 414 aa14.77□□□□□ -0.05
TRIM55-205ENST00000517647 QSER1Q2KHR3 1735 aa14.77□□□□□ -0.05
TRIM55-205ENST00000517647 CASZ1Q86V15 1759 aa14.76□□□□□ -0.05
TRIM55-205ENST00000517647 NUDCQ9Y266 331 aa14.76□□□□□ -0.05
TRIM55-205ENST00000517647 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
TRIM55-205ENST00000517647 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
TRIM55-205ENST00000517647 ZNF831Q5JPB2 1677 aa14.75□□□□□ -0.05
TRIM55-205ENST00000517647 ADAMTS7Q9UKP4 1686 aa14.75□□□□□ -0.05
TRIM55-205ENST00000517647 C1orf141Q5JVX7 400 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms