RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 TATP17735 454 aaPredicted RBP28.67■■■□□ 2.18
MTCL1-204ENST00000517554 IL13P35225 146 aa28.67■■■□□ 2.18
MTCL1-204ENST00000517554 BAG6P46379 1132 aa28.67■■■□□ 2.18
MTCL1-204ENST00000517554 APBA3O96018 575 aa28.66■■■□□ 2.18
MTCL1-204ENST00000517554 DDX10Q13206 875 aaKnown RBP28.66■■■□□ 2.18
MTCL1-204ENST00000517554 KCNQ2O43526 872 aa28.65■■■□□ 2.18
MTCL1-204ENST00000517554 ACSBG1Q96GR2 724 aa28.63■■■□□ 2.17
MTCL1-204ENST00000517554 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
MTCL1-204ENST00000517554 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
MTCL1-204ENST00000517554 EZH2Q15910 746 aaKnown RBP28.62■■■□□ 2.17
MTCL1-204ENST00000517554 AEBP1Q8IUX7 1158 aa28.62■■■□□ 2.17
MTCL1-204ENST00000517554 COL3A1P02461 1466 aaPredicted RBP28.61■■■□□ 2.17
MTCL1-204ENST00000517554 CYP27B1O15528 508 aa28.6■■■□□ 2.17
MTCL1-204ENST00000517554 PKD1L3Q7Z443 1732 aa28.59■■■□□ 2.17
MTCL1-204ENST00000517554 PPP2R1AP30153 589 aa28.59■■■□□ 2.17
MTCL1-204ENST00000517554 NHSQ6T4R5 1651 aa28.58■■■□□ 2.17
MTCL1-204ENST00000517554 PCDH11XQ9BZA7 1347 aa28.56■■■□□ 2.16
MTCL1-204ENST00000517554 PCDH11YQ9BZA8 1340 aa28.56■■■□□ 2.16
MTCL1-204ENST00000517554 KDRP35968 1356 aa28.55■■■□□ 2.16
MTCL1-204ENST00000517554 PARD3Q8TEW0 1356 aa28.55■■■□□ 2.16
MTCL1-204ENST00000517554 SULT6B1Q6IMI4 303 aa28.55■■■□□ 2.16
MTCL1-204ENST00000517554 DIAPH1O60610 1272 aaKnown RBP28.54■■■□□ 2.16
MTCL1-204ENST00000517554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.54■■■□□ 2.16
MTCL1-204ENST00000517554 PLSCR1O15162 318 aa28.54■■■□□ 2.16
MTCL1-204ENST00000517554 SPG7Q9UQ90 795 aa28.52■■■□□ 2.16
MTCL1-204ENST00000517554 PROM2Q8N271 834 aa28.51■■■□□ 2.15
MTCL1-204ENST00000517554 DOT1LQ8TEK3 1739 aa28.51■■■□□ 2.15
MTCL1-204ENST00000517554 PRIM1P49642 420 aaKnown RBP28.5■■■□□ 2.15
MTCL1-204ENST00000517554 RREB1Q92766 1687 aa28.5■■■□□ 2.15
MTCL1-204ENST00000517554 PLEKHG2Q9H7P9 1386 aa28.49■■■□□ 2.15
MTCL1-204ENST00000517554 HMOX1P09601 288 aa28.49■■■□□ 2.15
MTCL1-204ENST00000517554 NKX1-1Q15270 411 aaPredicted RBP28.49■■■□□ 2.15
MTCL1-204ENST00000517554 BTAF1O14981 1849 aa28.48■■■□□ 2.15
MTCL1-204ENST00000517554 PHKG2P15735 406 aa28.47■■■□□ 2.15
MTCL1-204ENST00000517554 RGPD3A6NKT7 1758 aaPredicted RBP28.47■■■□□ 2.15
MTCL1-204ENST00000517554 RGPD4Q7Z3J3 1758 aa28.47■■■□□ 2.15
MTCL1-204ENST00000517554 TOGARAM1Q9Y4F4 1720 aa28.46■■■□□ 2.15
MTCL1-204ENST00000517554 SYTL4Q96C24 671 aaPredicted RBP28.45■■■□□ 2.15
MTCL1-204ENST00000517554 NUP188Q5SRE5 1749 aa28.45■■■□□ 2.15
MTCL1-204ENST00000517554 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
MTCL1-204ENST00000517554 PLEKHO1Q53GL0 409 aaPredicted RBP28.44■■■□□ 2.14
MTCL1-204ENST00000517554 IFNL2Q8IZJ0 200 aa28.44■■■□□ 2.14
MTCL1-204ENST00000517554 U2SURPO15042 1029 aaKnown RBP28.42■■■□□ 2.14
MTCL1-204ENST00000517554 CFAP53Q96M91 514 aa28.42■■■□□ 2.14
MTCL1-204ENST00000517554 TXNRD1Q16881 649 aa28.41■■■□□ 2.14
MTCL1-204ENST00000517554 AMOTQ4VCS5 1084 aa28.41■■■□□ 2.14
MTCL1-204ENST00000517554 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
MTCL1-204ENST00000517554 RALBP1Q15311 655 aa28.4■■■□□ 2.14
MTCL1-204ENST00000517554 ZNF530Q6P9A1 599 aaPredicted RBP28.4■■■□□ 2.14
MTCL1-204ENST00000517554 PSDA5PKW4 1024 aaPredicted RBP28.37■■■□□ 2.13
MTCL1-204ENST00000517554 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
MTCL1-204ENST00000517554 KDM6AO15550 1401 aaPredicted RBP28.36■■■□□ 2.13
MTCL1-204ENST00000517554 ANO8Q9HCE9 1232 aaPredicted RBP28.36■■■□□ 2.13
MTCL1-204ENST00000517554 LRRC4BQ9NT99 713 aa28.36■■■□□ 2.13
MTCL1-204ENST00000517554 ITGB4P16144 1822 aa28.35■■■□□ 2.13
MTCL1-204ENST00000517554 R3HDM1Q15032 1099 aaKnown RBP28.35■■■□□ 2.13
MTCL1-204ENST00000517554 PIGBQ92521 554 aa28.35■■■□□ 2.13
MTCL1-204ENST00000517554 MTHFSDQ2M296 383 aaKnown RBP28.34■■■□□ 2.13
MTCL1-204ENST00000517554 RSPH6AQ9H0K4 717 aa28.33■■■□□ 2.13
MTCL1-204ENST00000517554 DCAF5Q96JK2 942 aa28.33■■■□□ 2.12
MTCL1-204ENST00000517554 NUDCQ9Y266 331 aa28.33■■■□□ 2.12
MTCL1-204ENST00000517554 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
MTCL1-204ENST00000517554 U2AF1L5P0DN76 240 aaPredicted RBP28.31■■■□□ 2.12
MTCL1-204ENST00000517554 KCNQ4P56696 695 aa28.31■■■□□ 2.12
MTCL1-204ENST00000517554 U2AF1Q01081 240 aaKnown RBP eCLIP28.31■■■□□ 2.12
MTCL1-204ENST00000517554 LY75O60449 1722 aa28.3■■■□□ 2.12
MTCL1-204ENST00000517554 C1orf141Q5JVX7 400 aa28.3■■■□□ 2.12
MTCL1-204ENST00000517554 PHACTR3Q96KR7 559 aa28.3■■■□□ 2.12
MTCL1-204ENST00000517554 MYBBP1AQ9BQG0 1328 aaKnown RBP28.3■■■□□ 2.12
MTCL1-204ENST00000517554 HSP90AB1P08238 724 aaKnown RBP28.29■■■□□ 2.12
MTCL1-204ENST00000517554 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 AKAP4Q5JQC9 854 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 PAPPAQ13219 1627 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 ERVV-2B6SEH9 535 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 TMOD3Q9NYL9 352 aa28.28■■■□□ 2.12
MTCL1-204ENST00000517554 PALLDQ8WX93 1383 aa28.26■■■□□ 2.11
MTCL1-204ENST00000517554 LGR6Q9HBX8 967 aa28.26■■■□□ 2.11
MTCL1-204ENST00000517554 SLC27A3Q5K4L6 730 aa28.25■■■□□ 2.11
MTCL1-204ENST00000517554 ASAP1Q9ULH1 1129 aa28.25■■■□□ 2.11
MTCL1-204ENST00000517554 FCHSD2O94868 740 aa28.24■■■□□ 2.11
MTCL1-204ENST00000517554 SRCAPQ6ZRS2 3230 aa28.24■■■□□ 2.11
MTCL1-204ENST00000517554 ATG3Q9NT62 314 aa28.23■■■□□ 2.11
MTCL1-204ENST00000517554 CCNL1Q9UK58 526 aaPredicted RBP28.23■■■□□ 2.11
MTCL1-204ENST00000517554 SLC15A2Q16348 729 aa28.22■■■□□ 2.11
MTCL1-204ENST00000517554 ZNF827Q17R98 1081 aa28.22■■■□□ 2.11
MTCL1-204ENST00000517554 SCN11AQ9UI33 1791 aa28.21■■■□□ 2.11
MTCL1-204ENST00000517554 RNMTO43148 476 aaKnown RBP28.21■■■□□ 2.11
MTCL1-204ENST00000517554 NFATC2IPQ8NCF5 419 aa28.21■■■□□ 2.11
MTCL1-204ENST00000517554 PDGFDQ9GZP0 370 aaPredicted RBP28.21■■■□□ 2.11
MTCL1-204ENST00000517554 ADAMTS7Q9UKP4 1686 aa28.21■■■□□ 2.11
MTCL1-204ENST00000517554 CABP4P57796 275 aa28.2■■■□□ 2.11
MTCL1-204ENST00000517554 SMARCC1Q92922 1105 aaPredicted RBP28.2■■■□□ 2.11
MTCL1-204ENST00000517554 AKT1S1Q96B36 256 aa28.2■■■□□ 2.1
MTCL1-204ENST00000517554 GAS2L2Q8NHY3 880 aa28.19■■■□□ 2.1
MTCL1-204ENST00000517554 STK32BQ9NY57 414 aa28.19■■■□□ 2.1
MTCL1-204ENST00000517554 PLEKHF1Q96S99 279 aa28.18■■■□□ 2.1
MTCL1-204ENST00000517554 MRC1P22897 1456 aa28.17■■■□□ 2.1
MTCL1-204ENST00000517554 MAP3K5Q99683 1374 aa28.16■■■□□ 2.1
MTCL1-204ENST00000517554 IL17REQ8NFR9 667 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms