RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 KCNQ2O43526 872 aa33.69■■■□□ 2.98
PVT1-204ENST00000517525 DDX54Q8TDD1 881 aaKnown RBP33.69■■■□□ 2.98
PVT1-204ENST00000517525 TATP17735 454 aaPredicted RBP33.68■■■□□ 2.98
PVT1-204ENST00000517525 TNNT2P45379 298 aaPredicted RBP33.68■■■□□ 2.98
PVT1-204ENST00000517525 NHSQ6T4R5 1651 aa33.68■■■□□ 2.98
PVT1-204ENST00000517525 NBPF14Q5TI25 921 aa33.65■■■□□ 2.98
PVT1-204ENST00000517525 PROM2Q8N271 834 aa33.65■■■□□ 2.98
PVT1-204ENST00000517525 EYA1Q99502 592 aa33.65■■■□□ 2.98
PVT1-204ENST00000517525 NPC1L1Q9UHC9 1359 aa33.64■■■□□ 2.98
PVT1-204ENST00000517525 ACSBG1Q96GR2 724 aa33.64■■■□□ 2.98
PVT1-204ENST00000517525 PLEKHG2Q9H7P9 1386 aa33.63■■■□□ 2.97
PVT1-204ENST00000517525 NUP188Q5SRE5 1749 aa33.63■■■□□ 2.97
PVT1-204ENST00000517525 EIF4A2Q14240 407 aaKnown RBP33.63■■■□□ 2.97
PVT1-204ENST00000517525 PSDA5PKW4 1024 aaPredicted RBP33.62■■■□□ 2.97
PVT1-204ENST00000517525 R3HDM1Q15032 1099 aaKnown RBP33.62■■■□□ 2.97
PVT1-204ENST00000517525 SHANK3Q9BYB0 1731 aa33.61■■■□□ 2.97
PVT1-204ENST00000517525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.6■■■□□ 2.976e-7■■□□□ 13.7
PVT1-204ENST00000517525 PCDH11XQ9BZA7 1347 aa33.59■■■□□ 2.97
PVT1-204ENST00000517525 PCDH11YQ9BZA8 1340 aa33.59■■■□□ 2.97
PVT1-204ENST00000517525 TXNRD1Q16881 649 aa33.58■■■□□ 2.97
PVT1-204ENST00000517525 IGSF1Q8N6C5 1336 aa33.56■■■□□ 2.96
PVT1-204ENST00000517525 CYP27B1O15528 508 aa33.53■■■□□ 2.96
PVT1-204ENST00000517525 PRIM1P49642 420 aaKnown RBP33.53■■■□□ 2.96
PVT1-204ENST00000517525 SPG7Q9UQ90 795 aa33.52■■■□□ 2.96
PVT1-204ENST00000517525 PKD1L3Q7Z443 1732 aa33.51■■■□□ 2.96
PVT1-204ENST00000517525 NKX1-1Q15270 411 aaPredicted RBP33.51■■■□□ 2.95
PVT1-204ENST00000517525 BTAF1O14981 1849 aa33.51■■■□□ 2.95
PVT1-204ENST00000517525 LRP5O75197 1615 aa33.5■■■□□ 2.95
PVT1-204ENST00000517525 ANO8Q9HCE9 1232 aaPredicted RBP33.48■■■□□ 2.95
PVT1-204ENST00000517525 KAT6BQ8WYB5 2073 aa33.46■■■□□ 2.95
PVT1-204ENST00000517525 IL13P35225 146 aa33.46■■■□□ 2.95
PVT1-204ENST00000517525 SLC27A3Q5K4L6 730 aa33.46■■■□□ 2.95
PVT1-204ENST00000517525 CC2D1BQ5T0F9 858 aaKnown RBP33.46■■■□□ 2.95
PVT1-204ENST00000517525 MTHFSP49914 203 aa33.45■■■□□ 2.95
PVT1-204ENST00000517525 DOT1LQ8TEK3 1739 aa33.45■■■□□ 2.94
PVT1-204ENST00000517525 SYTL4Q96C24 671 aaPredicted RBP33.44■■■□□ 2.94
PVT1-204ENST00000517525 KDRP35968 1356 aa33.42■■■□□ 2.94
PVT1-204ENST00000517525 SLC15A2Q16348 729 aa33.41■■■□□ 2.94
PVT1-204ENST00000517525 IFNL2Q8IZJ0 200 aa33.41■■■□□ 2.94
PVT1-204ENST00000517525 STK32BQ9NY57 414 aa33.41■■■□□ 2.94
PVT1-204ENST00000517525 LRRC4BQ9NT99 713 aa33.4■■■□□ 2.94
PVT1-204ENST00000517525 PHKG2P15735 406 aa33.39■■■□□ 2.94
PVT1-204ENST00000517525 AMOTQ4VCS5 1084 aa33.38■■■□□ 2.93
PVT1-204ENST00000517525 PAPPAQ13219 1627 aa33.38■■■□□ 2.93
PVT1-204ENST00000517525 PLEKHO1Q53GL0 409 aaPredicted RBP33.36■■■□□ 2.93
PVT1-204ENST00000517525 SULT6B1Q6IMI4 303 aa33.34■■■□□ 2.93
PVT1-204ENST00000517525 AEBP1Q8IUX7 1158 aa33.34■■■□□ 2.93
PVT1-204ENST00000517525 LY75O60449 1722 aa33.32■■■□□ 2.92
PVT1-204ENST00000517525 HMGB2P26583 209 aaKnown RBP33.32■■■□□ 2.92
PVT1-204ENST00000517525 DIAPH1O60610 1272 aaKnown RBP33.31■■■□□ 2.92
PVT1-204ENST00000517525 HSP90AB1P08238 724 aaKnown RBP33.31■■■□□ 2.92
PVT1-204ENST00000517525 MPRIPQ6WCQ1 1025 aa33.31■■■□□ 2.92
PVT1-204ENST00000517525 AKT1S1Q96B36 256 aa33.31■■■□□ 2.92
PVT1-204ENST00000517525 SMARCC1Q92922 1105 aaPredicted RBP33.3■■■□□ 2.92
PVT1-204ENST00000517525 TOGARAM1Q9Y4F4 1720 aa33.3■■■□□ 2.92
PVT1-204ENST00000517525 CASZ1Q86V15 1759 aa33.29■■■□□ 2.92
PVT1-204ENST00000517525 PIGBQ92521 554 aa33.29■■■□□ 2.92
PVT1-204ENST00000517525 SPON1Q9HCB6 807 aa33.29■■■□□ 2.92
PVT1-204ENST00000517525 COL3A1P02461 1466 aaPredicted RBP33.27■■■□□ 2.92
PVT1-204ENST00000517525 DCAF5Q96JK2 942 aa33.27■■■□□ 2.92
PVT1-204ENST00000517525 CCNL1Q9UK58 526 aaPredicted RBP33.27■■■□□ 2.92
PVT1-204ENST00000517525 ERVV-2B6SEH9 535 aa33.26■■■□□ 2.91
PVT1-204ENST00000517525 ZNF827Q17R98 1081 aa33.26■■■□□ 2.91
PVT1-204ENST00000517525 PALLDQ8WX93 1383 aa33.25■■■□□ 2.91
PVT1-204ENST00000517525 ZNF530Q6P9A1 599 aaPredicted RBP33.25■■■□□ 2.91
PVT1-204ENST00000517525 ITGB4P16144 1822 aa33.24■■■□□ 2.91
PVT1-204ENST00000517525 PDGFDQ9GZP0 370 aaPredicted RBP33.24■■■□□ 2.91
PVT1-204ENST00000517525 TMOD3Q9NYL9 352 aa33.24■■■□□ 2.91
PVT1-204ENST00000517525 KCNQ4P56696 695 aa33.2■■■□□ 2.91
PVT1-204ENST00000517525 PPP2R1AP30153 589 aa33.18■■■□□ 2.9
PVT1-204ENST00000517525 CNGB1Q14028 1251 aaPredicted RBP33.18■■■□□ 2.9
PVT1-204ENST00000517525 C1orf141Q5JVX7 400 aa33.18■■■□□ 2.9
PVT1-204ENST00000517525 MTFR1LQ9H019 292 aa33.18■■■□□ 2.9
PVT1-204ENST00000517525 KDM6AO15550 1401 aaPredicted RBP33.18■■■□□ 2.9
PVT1-204ENST00000517525 SLC16A10Q8TF71 515 aa33.17■■■□□ 2.9
PVT1-204ENST00000517525 CFAP53Q96M91 514 aa33.17■■■□□ 2.9
PVT1-204ENST00000517525 HMOX1P09601 288 aa33.16■■■□□ 2.9
PVT1-204ENST00000517525 QSER1Q2KHR3 1735 aa33.16■■■□□ 2.9
PVT1-204ENST00000517525 AKAP4Q5JQC9 854 aa33.15■■■□□ 2.9
PVT1-204ENST00000517525 PNPLA7Q6ZV29 1317 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 ZBTB7AO95365 584 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 PTGER2P43116 358 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 ATG3Q9NT62 314 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 TFCP2L1Q9NZI6 479 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 ASAP1Q9ULH1 1129 aa33.14■■■□□ 2.9
PVT1-204ENST00000517525 LOC102724428A0A0B4J2F2 783 aa33.12■■■□□ 2.89
PVT1-204ENST00000517525 SIK1P57059 783 aa33.12■■■□□ 2.89
PVT1-204ENST00000517525 SGIP1Q9BQI5 828 aa33.12■■■□□ 2.89
PVT1-204ENST00000517525 CABP4P57796 275 aa33.1■■■□□ 2.89
PVT1-204ENST00000517525 U2SURPO15042 1029 aaKnown RBP33.08■■■□□ 2.89
PVT1-204ENST00000517525 ZEB1P37275 1124 aaPredicted RBP33.08■■■□□ 2.89
PVT1-204ENST00000517525 MTHFSDQ2M296 383 aaKnown RBP33.08■■■□□ 2.89
PVT1-204ENST00000517525 NUDCQ9Y266 331 aa33.08■■■□□ 2.89
PVT1-204ENST00000517525 ATF5Q9Y2D1 282 aaPredicted RBP33.08■■■□□ 2.89
PVT1-204ENST00000517525 C5P01031 1676 aa33.07■■■□□ 2.88
PVT1-204ENST00000517525 FLAD1Q8NFF5 587 aa33.06■■■□□ 2.88
PVT1-204ENST00000517525 PPP1R1BQ9UD71 204 aaPredicted RBP33.06■■■□□ 2.88
PVT1-204ENST00000517525 TAF1LQ8IZX4 1826 aa33.05■■■□□ 2.88
PVT1-204ENST00000517525 NFATC2IPQ8NCF5 419 aa33.03■■■□□ 2.88
PVT1-204ENST00000517525 ZNF831Q5JPB2 1677 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms