RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 FOXC1Q12948 553 aa8.03□□□□□ -1.12
LINC00534-201ENST00000517400 Q6ZNB5 142 aa8.03□□□□□ -1.12
LINC00534-201ENST00000517400 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
LINC00534-201ENST00000517400 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
LINC00534-201ENST00000517400 DNAAF2Q9NVR5 837 aaKnown RBP8.03□□□□□ -1.12
LINC00534-201ENST00000517400 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
LINC00534-201ENST00000517400 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
LINC00534-201ENST00000517400 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
LINC00534-201ENST00000517400 TMEM88BA6NKF7 163 aa8.02□□□□□ -1.13
LINC00534-201ENST00000517400 GDF9O60383 454 aa8.02□□□□□ -1.13
LINC00534-201ENST00000517400 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
LINC00534-201ENST00000517400 GTF2IP78347 998 aa8.02□□□□□ -1.13
LINC00534-201ENST00000517400 LAPTM4AQ15012 233 aa8.02□□□□□ -1.13
LINC00534-201ENST00000517400 DKK1O94907 266 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 ALDH1A1P00352 501 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 CC2D2BQ6DHV5 1058 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 ANKMY2Q8IV38 441 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 SIX5Q8N196 739 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 TMPRSS4Q9NRS4 437 aa8.01□□□□□ -1.13
LINC00534-201ENST00000517400 NRG2O14511 850 aaPredicted RBP8□□□□□ -1.13
LINC00534-201ENST00000517400 NR3C2P08235 984 aa8□□□□□ -1.13
LINC00534-201ENST00000517400 SCTRP47872 440 aa8□□□□□ -1.13
LINC00534-201ENST00000517400 PPP1R26Q5T8A7 1209 aaPredicted RBP8□□□□□ -1.13
LINC00534-201ENST00000517400 FAM200AQ8TCP9 573 aa8□□□□□ -1.13
LINC00534-201ENST00000517400 EMILIN1Q9Y6C2 1016 aa8□□□□□ -1.13
LINC00534-201ENST00000517400 PRR20EP86478 221 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 PRR20CP86479 221 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 PRR20DP86480 221 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 PRR20BP86481 221 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 PRR20AP86496 221 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 MYT1Q01538 1121 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 DPYDQ12882 1025 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 ZNF784Q8NCA9 323 aaPredicted RBP7.99□□□□□ -1.13
LINC00534-201ENST00000517400 STK32AQ8WU08 396 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 ZNF594Q96JF6 807 aaPredicted RBP7.99□□□□□ -1.13
LINC00534-201ENST00000517400 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
LINC00534-201ENST00000517400 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 KIAA1024Q9UPX6 916 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
LINC00534-201ENST00000517400 LILRA1O75019 489 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 NNTQ13423 1086 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 CCDC102BQ68D86 513 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 CYP4X1Q8N118 509 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 KCTD17Q8N5Z5 321 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 OSBPL3Q9H4L5 887 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
LINC00534-201ENST00000517400 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
LINC00534-201ENST00000517400 SEC13P55735 322 aa7.97□□□□□ -1.13
LINC00534-201ENST00000517400 FAM69CQ0P6D2 419 aa7.97□□□□□ -1.13
LINC00534-201ENST00000517400 CYLDQ9NQC7 956 aa7.97□□□□□ -1.13
LINC00534-201ENST00000517400 RBM19Q9Y4C8 960 aaKnown RBP7.97□□□□□ -1.13
LINC00534-201ENST00000517400 TTC24A2A3L6 582 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-201ENST00000517400 J3QL48 77 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 BRD1O95696 1058 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 PSME1Q06323 249 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 TPCN2Q8NHX9 752 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 KLF16Q9BXK1 252 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-201ENST00000517400 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
LINC00534-201ENST00000517400 M0R2N6 131 aa7.95□□□□□ -1.14
LINC00534-201ENST00000517400 TNFRSF10AO00220 468 aa7.95□□□□□ -1.14
LINC00534-201ENST00000517400 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
LINC00534-201ENST00000517400 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
LINC00534-201ENST00000517400 GNRH1P01148 92 aa7.94□□□□□ -1.14
LINC00534-201ENST00000517400 SMPD1P17405 629 aa7.94□□□□□ -1.14
LINC00534-201ENST00000517400 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
LINC00534-201ENST00000517400 CLP1Q92989 425 aaKnown RBP7.94□□□□□ -1.14
LINC00534-201ENST00000517400 SFI1A8K8P3 1242 aa7.93□□□□□ -1.14
LINC00534-201ENST00000517400 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
LINC00534-201ENST00000517400 Q6ZVU0 165 aa7.93□□□□□ -1.14
LINC00534-201ENST00000517400 TMEM229AB2RXF0 380 aa7.92□□□□□ -1.14
LINC00534-201ENST00000517400 SCNN1DP51172 638 aa7.92□□□□□ -1.14
LINC00534-201ENST00000517400 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
LINC00534-201ENST00000517400 AEBP1Q8IUX7 1158 aa7.92□□□□□ -1.14
LINC00534-201ENST00000517400 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
LINC00534-201ENST00000517400 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
LINC00534-201ENST00000517400 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 PATL2C9JE40 543 aaKnown RBP7.91□□□□□ -1.14
LINC00534-201ENST00000517400 BACH1O14867 736 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 ZIC2O95409 532 aaPredicted RBP7.91□□□□□ -1.14
LINC00534-201ENST00000517400 INHAP05111 366 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 GDF10P55107 478 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 KCNA1Q09470 495 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 ZNF358Q9NW07 568 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 SLAIN2Q9P270 581 aa7.91□□□□□ -1.14
LINC00534-201ENST00000517400 ADH1AP07327 375 aa7.9□□□□□ -1.14
LINC00534-201ENST00000517400 TIMP2P16035 220 aa7.9□□□□□ -1.14
LINC00534-201ENST00000517400 SSFA2P28290 1259 aa7.9□□□□□ -1.14
LINC00534-201ENST00000517400 WDR4P57081 412 aaKnown RBP7.9□□□□□ -1.14
LINC00534-201ENST00000517400 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
LINC00534-201ENST00000517400 ETNK1Q9HBU6 452 aa7.9□□□□□ -1.14
LINC00534-201ENST00000517400 CBLBQ13191 982 aa7.89□□□□□ -1.15
LINC00534-201ENST00000517400 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
LINC00534-201ENST00000517400 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
LINC00534-201ENST00000517400 HPS1Q92902 700 aa7.89□□□□□ -1.15
LINC00534-201ENST00000517400 SLC4A9Q96Q91 983 aa7.89□□□□□ -1.15
LINC00534-201ENST00000517400 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
LINC00534-201ENST00000517400 RB1CC1Q8TDY2 1594 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms