RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RTF1Q92541 710 aaKnown RBP7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 RUNDC1Q96C34 613 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PCDH11XQ9BZA7 1347 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PCDH11YQ9BZA8 1340 aa7.19□□□□□ -1.26
SCARNA16.4-201ENST00000516956 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 RGPD5Q99666 1765 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 SF3B2Q13435 895 aaKnown RBP7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 IFNL2Q8IZJ0 200 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 RGS17Q9UGC6 210 aaPredicted RBP7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 ADAMTS8Q9UP79 889 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 NRAPQ86VF7 1730 aa7.18□□□□□ -1.26
SCARNA16.4-201ENST00000516956 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
SCARNA16.4-201ENST00000516956 NEUROD2Q15784 382 aa7.17□□□□□ -1.26
SCARNA16.4-201ENST00000516956 CCDC146Q8IYE0 955 aa7.17□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PNISRQ8TF01 805 aaKnown RBP7.17□□□□□ -1.26
SCARNA16.4-201ENST00000516956 SYTL4Q96C24 671 aaPredicted RBP7.17□□□□□ -1.26
SCARNA16.4-201ENST00000516956 GNAT3A8MTJ3 354 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 AKAP4Q5JQC9 854 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 FAM196AQ6ZSG2 479 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 PLEKHG2Q9H7P9 1386 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 OVOS2A0A0G2JMS6 1433 aa7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 COL3A1P02461 1466 aaPredicted RBP7.16□□□□□ -1.26
SCARNA16.4-201ENST00000516956 RIPK4P57078 832 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 CABP4P57796 275 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 CALD1Q05682 793 aaKnown RBP7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 TEFQ10587 303 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 NFE2L2Q16236 605 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 CCDC184Q52MB2 194 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 DCAF5Q96JK2 942 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 KDRP35968 1356 aa7.15□□□□□ -1.26
SCARNA16.4-201ENST00000516956 GLI3P10071 1580 aa7.15□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PARP4Q9UKK3 1724 aaKnown RBP7.15□□□□□ -1.27
SCARNA16.4-201ENST00000516956 HTATSF1O43719 755 aaKnown RBP7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MEGF6O75095 1541 aa7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PHKG2P15735 406 aa7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MTHFSDQ2M296 383 aaKnown RBP7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TNS2Q63HR2 1409 aa7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MARCH10Q8NA82 808 aaPredicted RBP7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PHACTR3Q96KR7 559 aa7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
SCARNA16.4-201ENST00000516956 DISP2A7MBM2 1401 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RGS12O14924 1447 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MAP3K5Q99683 1374 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 APAF1O14727 1248 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 HMGB2P26583 209 aaKnown RBP7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TMPOP42166 694 aaKnown RBP7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 FAM182BQ5T319 152 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MPRIPQ6WCQ1 1025 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 NGEFQ8N5V2 710 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RRP7AQ9Y3A4 280 aaKnown RBP7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RGPD2P0DJD1 1756 aa7.13□□□□□ -1.27
SCARNA16.4-201ENST00000516956 NCAPD2Q15021 1401 aa7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 ERVV-2B6SEH9 535 aa7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 CYP27B1O15528 508 aa7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RNMTO43148 476 aaKnown RBP7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PRIM1P49642 420 aaKnown RBP7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TTC5Q8N0Z6 440 aa7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PLEKHF1Q96S99 279 aa7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 LAS1LQ9Y4W2 734 aaKnown RBP7.12□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RGPD1P0DJD0 1748 aa7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TRIM37O94972 964 aa7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 APBA3O96018 575 aa7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 HNRNPUQ00839 825 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 NKX1-1Q15270 411 aaPredicted RBP7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 MCM10Q7L590 875 aa7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 SMARCC1Q92922 1105 aaPredicted RBP7.11□□□□□ -1.27
SCARNA16.4-201ENST00000516956 THSD7AQ9UPZ6 1657 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 SENP3-EIF4A1A0A087X0R7 540 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 BAG6P46379 1132 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 TAF7Q15545 349 aaPredicted RBP7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 BCL11BQ9C0K0 894 aaPredicted RBP7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 LGR6Q9HBX8 967 aa7.1□□□□□ -1.27
SCARNA16.4-201ENST00000516956 WNK3Q9BYP7 1800 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 BTBD11A6QL63 1104 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 GNAI1P63096 354 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 DCTN1Q14203 1278 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 NPM2Q86SE8 214 aaKnown RBP7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 YTHDC1Q96MU7 727 aaKnown RBP7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 RBM42Q9BTD8 480 aaKnown RBP7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 CHMP4AQ9BY43 222 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 SLC52A2Q9HAB3 445 aa7.09□□□□□ -1.27
SCARNA16.4-201ENST00000516956 PKD1L3Q7Z443 1732 aa7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 CCDC27Q2M243 656 aa7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 NCBP3Q53F19 620 aaKnown RBP7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 IL17REQ8NFR9 667 aa7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 MYH16Q9H6N6 1097 aa7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 TSPYL4Q9UJ04 414 aa7.08□□□□□ -1.28
SCARNA16.4-201ENST00000516956 KCNQ2O43526 872 aa7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 PTCD1O75127 700 aaKnown RBP7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 GOLGA2Q08379 1002 aa7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 WDR63Q8IWG1 891 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms