RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 CBLBQ13191 982 aa9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 SCARF1Q14162 830 aa9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
RN7SKP248-201ENST00000516278 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 ADAMTS19Q8TE59 1207 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 YTHDC1Q96MU7 727 aaKnown RBP9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 CYLDQ9NQC7 956 aa9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 SUPT16HQ9Y5B9 1047 aaKnown RBP9.02□□□□□ -0.97
RN7SKP248-201ENST00000516278 BMP1P13497 986 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 USP4Q13107 963 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 GLMNQ92990 594 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 KIF21BO75037 1637 aa9.01□□□□□ -0.97
RN7SKP248-201ENST00000516278 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
RN7SKP248-201ENST00000516278 MYCP01106 439 aaPredicted RBP9□□□□□ -0.97
RN7SKP248-201ENST00000516278 NEFLP07196 543 aa9□□□□□ -0.97
RN7SKP248-201ENST00000516278 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
RN7SKP248-201ENST00000516278 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
RN7SKP248-201ENST00000516278 PLPP7Q8NBV4 271 aa9□□□□□ -0.97
RN7SKP248-201ENST00000516278 KIFC2Q96AC6 838 aa9□□□□□ -0.97
RN7SKP248-201ENST00000516278 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
RN7SKP248-201ENST00000516278 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
RN7SKP248-201ENST00000516278 VPS8Q8N3P4 1428 aa8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 ADH1AP07327 375 aa8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 ZFP42Q96MM3 310 aa8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 CDCA7Q9BWT1 371 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
RN7SKP248-201ENST00000516278 PIK3CDO00329 1044 aa8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 BMP2P12643 396 aa8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 SKIP12755 728 aa8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 TRIM47Q96LD4 638 aa8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
RN7SKP248-201ENST00000516278 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 PTGIRP43119 386 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 SCTRP47872 440 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 RELBQ01201 579 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 C6orf118Q5T5N4 469 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 ERICH6BQ5W0A0 696 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
RN7SKP248-201ENST00000516278 POTECB2RU33 542 aa8.96□□□□□ -0.98
RN7SKP248-201ENST00000516278 ATP5J2-PTCD1G3V325 749 aa8.96□□□□□ -0.98
RN7SKP248-201ENST00000516278 SPINT1O43278 529 aa8.96□□□□□ -0.98
RN7SKP248-201ENST00000516278 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
RN7SKP248-201ENST00000516278 OSBPL3Q9H4L5 887 aa8.96□□□□□ -0.98
RN7SKP248-201ENST00000516278 WIZO95785 1651 aa8.95□□□□□ -0.98
RN7SKP248-201ENST00000516278 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
RN7SKP248-201ENST00000516278 KDF1Q8NAX2 398 aaPredicted RBP8.95□□□□□ -0.98
RN7SKP248-201ENST00000516278 UCN2Q96RP3 112 aa8.95□□□□□ -0.98
RN7SKP248-201ENST00000516278 ATP9BO43861 1147 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 GNRH1P01148 92 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 EML3Q32P44 896 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 CLIP1P30622 1438 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
RN7SKP248-201ENST00000516278 TFIP11Q9UBB9 837 aaKnown RBP8.93□□□□□ -0.98
RN7SKP248-201ENST00000516278 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
RN7SKP248-201ENST00000516278 CUX2O14529 1486 aa8.93□□□□□ -0.98
RN7SKP248-201ENST00000516278 CCDC88BA6NC98 1476 aa8.92□□□□□ -0.98
RN7SKP248-201ENST00000516278 USP17L5A8MUK1 530 aa8.92□□□□□ -0.98
RN7SKP248-201ENST00000516278 PLEKHM2Q8IWE5 1019 aa8.92□□□□□ -0.98
RN7SKP248-201ENST00000516278 SOS2Q07890 1332 aaPredicted RBP8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 NCOA4Q13772 614 aa8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 INSM2Q96T92 566 aaPredicted RBP8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 PPP1R12CQ9BZL4 782 aa8.91□□□□□ -0.98
RN7SKP248-201ENST00000516278 SMARCA2P51531 1590 aa8.9□□□□□ -0.98
RN7SKP248-201ENST00000516278 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
RN7SKP248-201ENST00000516278 TTLL8A6PVC2 850 aa8.9□□□□□ -0.98
RN7SKP248-201ENST00000516278 CCER2I3L3R5 266 aa8.9□□□□□ -0.98
RN7SKP248-201ENST00000516278 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 MAN1A2O60476 641 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 CLN3Q13286 438 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 ESCO1Q5FWF5 840 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 USP17L2Q6R6M4 530 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 DEPDC4Q8N2C3 294 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
RN7SKP248-201ENST00000516278 SMARCA4P51532 1647 aa8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 FANCIQ9NVI1 1328 aa8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 GPC1P35052 558 aa8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
RN7SKP248-201ENST00000516278 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms