RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
TRIM41-209ENST00000515834 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
TRIM41-209ENST00000515834 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
TRIM41-209ENST00000515834 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 PSMD1Q99460 953 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 CDKL5O76039 1030 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
TRIM41-209ENST00000515834 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
TRIM41-209ENST00000515834 CEP57L1Q8IYX8 460 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 WWC3Q9ULE0 1092 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
TRIM41-209ENST00000515834 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
TRIM41-209ENST00000515834 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 TTC16Q8NEE8 873 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 ANAPC15P60006 121 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 VTI1AQ96AJ9 217 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
TRIM41-209ENST00000515834 FEZ1Q99689 392 aa12.96□□□□□ -0.34
TRIM41-209ENST00000515834 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
TRIM41-209ENST00000515834 MYD88Q99836 296 aa12.96□□□□□ -0.34
TRIM41-209ENST00000515834 TNMDQ9H2S6 317 aa12.96□□□□□ -0.34
TRIM41-209ENST00000515834 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
TRIM41-209ENST00000515834 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 CTNNA3Q9UI47 895 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
TRIM41-209ENST00000515834 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
TRIM41-209ENST00000515834 CUL5Q93034 780 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 FAM193AP78312 1265 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
TRIM41-209ENST00000515834 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
TRIM41-209ENST00000515834 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
TRIM41-209ENST00000515834 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
TRIM41-209ENST00000515834 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
TRIM41-209ENST00000515834 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 EZRP15311 586 aaKnown RBP12.94□□□□□ -0.34
TRIM41-209ENST00000515834 MPNDQ8N594 471 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 CCP110O43303 1012 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
TRIM41-209ENST00000515834 CCDC112Q8NEF3 446 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
TRIM41-209ENST00000515834 EIF5P55010 431 aaKnown RBP12.93□□□□□ -0.34
TRIM41-209ENST00000515834 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
TRIM41-209ENST00000515834 GPTP24298 496 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 MCM2P49736 904 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 LRRFIP2Q9Y608 721 aaKnown RBP12.93□□□□□ -0.34
TRIM41-209ENST00000515834 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
TRIM41-209ENST00000515834 PPP1R12BO60237 982 aaPredicted RBP12.92□□□□□ -0.34
TRIM41-209ENST00000515834 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
TRIM41-209ENST00000515834 TXLNBQ8N3L3 684 aa12.92□□□□□ -0.34
TRIM41-209ENST00000515834 KCNH5Q8NCM2 988 aa12.92□□□□□ -0.34
TRIM41-209ENST00000515834 EXOC5O00471 708 aa12.92□□□□□ -0.34
TRIM41-209ENST00000515834 RABEP1Q15276 862 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 WASF1Q92558 559 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 CUX1P39880 1505 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 COMMD10Q9Y6G5 202 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 JAKMIP3Q5VZ66 844 aa12.91□□□□□ -0.34
TRIM41-209ENST00000515834 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
TRIM41-209ENST00000515834 RFC4P35249 363 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 NAPBQ9H115 298 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 FOXO3O43524 673 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 MCM10Q7L590 875 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 SLC5A1P13866 664 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 KRT85P78386 507 aa12.9□□□□□ -0.34
TRIM41-209ENST00000515834 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
TRIM41-209ENST00000515834 AAMPQ13685 434 aa12.9□□□□□ -0.35
TRIM41-209ENST00000515834 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.35
TRIM41-209ENST00000515834 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 TAF4BQ92750 862 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 MBD3O95983 291 aa12.89□□□□□ -0.35
TRIM41-209ENST00000515834 FGD6Q6ZV73 1430 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms