RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
PCDH1-208ENST00000515351 FLT4P35916 1363 aa18.73■□□□□ 0.59
PCDH1-208ENST00000515351 HSCBQ8IWL3 235 aa18.73■□□□□ 0.59
PCDH1-208ENST00000515351 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
PCDH1-208ENST00000515351 PTPRCP08575 1304 aa18.72■□□□□ 0.59
PCDH1-208ENST00000515351 KDRP35968 1356 aa18.72■□□□□ 0.59
PCDH1-208ENST00000515351 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
PCDH1-208ENST00000515351 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
PCDH1-208ENST00000515351 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
PCDH1-208ENST00000515351 SNX21Q969T3 373 aa18.71■□□□□ 0.59
PCDH1-208ENST00000515351 CHMP5Q9NZZ3 219 aa18.71■□□□□ 0.59
PCDH1-208ENST00000515351 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.58
PCDH1-208ENST00000515351 NGDNQ8NEJ9 315 aaKnown RBP18.7■□□□□ 0.58
PCDH1-208ENST00000515351 CEP170BQ9Y4F5 1589 aaPredicted RBP18.7■□□□□ 0.58
PCDH1-208ENST00000515351 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
PCDH1-208ENST00000515351 MSH6P52701 1360 aa18.69■□□□□ 0.58
PCDH1-208ENST00000515351 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
PCDH1-208ENST00000515351 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
PCDH1-208ENST00000515351 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
PCDH1-208ENST00000515351 LRRC37A3O60309 1634 aa18.68■□□□□ 0.58
PCDH1-208ENST00000515351 FOXO3O43524 673 aa18.68■□□□□ 0.58
PCDH1-208ENST00000515351 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
PCDH1-208ENST00000515351 RPAP2Q8IXW5 612 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-208ENST00000515351 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
PCDH1-208ENST00000515351 KIF2CQ99661 725 aa18.67■□□□□ 0.58
PCDH1-208ENST00000515351 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
PCDH1-208ENST00000515351 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
PCDH1-208ENST00000515351 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
PCDH1-208ENST00000515351 ANKARQ7Z5J8 1434 aa18.67■□□□□ 0.58
PCDH1-208ENST00000515351 CACNA1FO60840 1977 aa18.67■□□□□ 0.58
PCDH1-208ENST00000515351 CDC45O75419 566 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 AMPHP49418 695 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 EYA1Q99502 592 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 GSPT1P15170 499 aaKnown RBP18.66■□□□□ 0.58
PCDH1-208ENST00000515351 MCM4P33991 863 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 MIS18AQ9NYP9 233 aa18.66■□□□□ 0.58
PCDH1-208ENST00000515351 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
PCDH1-208ENST00000515351 DDIT3P35638 169 aa18.65■□□□□ 0.58
PCDH1-208ENST00000515351 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
PCDH1-208ENST00000515351 FAM208AQ9UK61 1670 aaKnown RBP18.65■□□□□ 0.58
PCDH1-208ENST00000515351 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.58
PCDH1-208ENST00000515351 MEIS3Q99687 375 aa18.64■□□□□ 0.57
PCDH1-208ENST00000515351 TTC22Q5TAA0 569 aa18.63■□□□□ 0.57
PCDH1-208ENST00000515351 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
PCDH1-208ENST00000515351 NLRP6P59044 892 aa18.62■□□□□ 0.57
PCDH1-208ENST00000515351 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
PCDH1-208ENST00000515351 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
PCDH1-208ENST00000515351 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-208ENST00000515351 N4BP2Q86UW6 1770 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-208ENST00000515351 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
PCDH1-208ENST00000515351 KCNA6P17658 529 aa18.6■□□□□ 0.57
PCDH1-208ENST00000515351 G2E3Q7L622 706 aa18.6■□□□□ 0.57
PCDH1-208ENST00000515351 LTN1O94822 1766 aa18.6■□□□□ 0.57
PCDH1-208ENST00000515351 HOXC9P31274 260 aa18.59■□□□□ 0.57
PCDH1-208ENST00000515351 CCT4P50991 539 aaKnown RBP18.59■□□□□ 0.57
PCDH1-208ENST00000515351 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
PCDH1-208ENST00000515351 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
PCDH1-208ENST00000515351 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
PCDH1-208ENST00000515351 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
PCDH1-208ENST00000515351 CHD2O14647 1828 aaKnown RBP18.57■□□□□ 0.56
PCDH1-208ENST00000515351 F6X3S4 739 aa18.57■□□□□ 0.56
PCDH1-208ENST00000515351 HMMRO75330 724 aa18.57■□□□□ 0.56
PCDH1-208ENST00000515351 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
PCDH1-208ENST00000515351 RTN4Q9NQC3 1192 aaKnown RBP18.57■□□□□ 0.56
PCDH1-208ENST00000515351 K7ELQ4 463 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-208ENST00000515351 SMARCA5O60264 1052 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-208ENST00000515351 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
PCDH1-208ENST00000515351 NUTM2GQ5VZR2 741 aa18.56■□□□□ 0.56
PCDH1-208ENST00000515351 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
PCDH1-208ENST00000515351 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
PCDH1-208ENST00000515351 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
PCDH1-208ENST00000515351 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
PCDH1-208ENST00000515351 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
PCDH1-208ENST00000515351 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
PCDH1-208ENST00000515351 APBB1O00213 710 aa18.55■□□□□ 0.56
PCDH1-208ENST00000515351 TRAK2O60296 914 aa18.55■□□□□ 0.56
PCDH1-208ENST00000515351 SDSP20132 328 aa18.55■□□□□ 0.56
PCDH1-208ENST00000515351 CCDC30Q5VVM6 783 aa18.54■□□□□ 0.56
PCDH1-208ENST00000515351 SOS1Q07889 1333 aaPredicted RBP18.53■□□□□ 0.56
PCDH1-208ENST00000515351 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
PCDH1-208ENST00000515351 HSP90AA1P07900 732 aaKnown RBP18.53■□□□□ 0.56
PCDH1-208ENST00000515351 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
PCDH1-208ENST00000515351 TNPO1Q92973 898 aaKnown RBP18.53■□□□□ 0.56
PCDH1-208ENST00000515351 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
PCDH1-208ENST00000515351 GNAI2P04899 355 aa18.52■□□□□ 0.56
PCDH1-208ENST00000515351 FLIIQ13045 1269 aa18.52■□□□□ 0.56
PCDH1-208ENST00000515351 RABEP1Q15276 862 aa18.52■□□□□ 0.56
PCDH1-208ENST00000515351 IL17REQ8NFR9 667 aa18.52■□□□□ 0.56
PCDH1-208ENST00000515351 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.56
PCDH1-208ENST00000515351 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
PCDH1-208ENST00000515351 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
PCDH1-208ENST00000515351 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
PCDH1-208ENST00000515351 FSD2A1L4K1 749 aa18.5■□□□□ 0.55
PCDH1-208ENST00000515351 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-208ENST00000515351 LTV1Q96GA3 475 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-208ENST00000515351 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-208ENST00000515351 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-208ENST00000515351 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms