RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 E9PCH4 1651 aa16.81■□□□□ 0.28
TSPAN17-208ENST00000514705 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
TSPAN17-208ENST00000514705 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
TSPAN17-208ENST00000514705 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
TSPAN17-208ENST00000514705 MEIS3Q99687 375 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 IL1RAPL2Q9NP60 686 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 OFD1O75665 1012 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 NPATQ14207 1427 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 ARHGAP45Q92619 1136 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
TSPAN17-208ENST00000514705 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
TSPAN17-208ENST00000514705 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
TSPAN17-208ENST00000514705 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
TSPAN17-208ENST00000514705 GNAI2P04899 355 aa16.79■□□□□ 0.28
TSPAN17-208ENST00000514705 SPC24Q8NBT2 197 aa16.79■□□□□ 0.28
TSPAN17-208ENST00000514705 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 MCM2P49736 904 aa16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
TSPAN17-208ENST00000514705 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
TSPAN17-208ENST00000514705 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
TSPAN17-208ENST00000514705 DCTPP1Q9H773 170 aa16.77■□□□□ 0.28
TSPAN17-208ENST00000514705 USP25Q9UHP3 1055 aa16.77■□□□□ 0.28
TSPAN17-208ENST00000514705 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.28
TSPAN17-208ENST00000514705 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.27
TSPAN17-208ENST00000514705 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
TSPAN17-208ENST00000514705 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
TSPAN17-208ENST00000514705 LRSAM1Q6UWE0 723 aa16.76■□□□□ 0.27
TSPAN17-208ENST00000514705 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
TSPAN17-208ENST00000514705 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
TSPAN17-208ENST00000514705 ZRSR1Q15695 479 aaKnown RBP16.75■□□□□ 0.27
TSPAN17-208ENST00000514705 ANKRD44Q8N8A2 993 aa16.75■□□□□ 0.27
TSPAN17-208ENST00000514705 ZKSCAN5Q9Y2L8 839 aa16.75■□□□□ 0.27
TSPAN17-208ENST00000514705 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 CCDC61Q9Y6R9 512 aa16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
TSPAN17-208ENST00000514705 GNAI3P08754 354 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 MX1P20591 662 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 SIRT2Q8IXJ6 389 aa16.73■□□□□ 0.27
TSPAN17-208ENST00000514705 NLRP6P59044 892 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 CCT4P50991 539 aaKnown RBP16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 ZNF445P59923 1031 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 PPP1R9BQ96SB3 815 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
TSPAN17-208ENST00000514705 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
TSPAN17-208ENST00000514705 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
TSPAN17-208ENST00000514705 TMEM63CQ9P1W3 806 aa16.71■□□□□ 0.27
TSPAN17-208ENST00000514705 PDE1AP54750 535 aa16.71■□□□□ 0.27
TSPAN17-208ENST00000514705 NOL7Q9UMY1 257 aaKnown RBP16.71■□□□□ 0.27
TSPAN17-208ENST00000514705 TRPM2O94759 1503 aa16.7■□□□□ 0.26
TSPAN17-208ENST00000514705 DTNBO60941 627 aa16.7■□□□□ 0.26
TSPAN17-208ENST00000514705 HCLS1P14317 486 aaPredicted RBP16.7■□□□□ 0.26
TSPAN17-208ENST00000514705 KIF2CQ99661 725 aa16.7■□□□□ 0.26
TSPAN17-208ENST00000514705 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 UNC13BO14795 1591 aa16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
TSPAN17-208ENST00000514705 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 ZKSCAN1P17029 563 aaPredicted RBP16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 CBX1P83916 185 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 PUS7Q96PZ0 661 aaKnown RBP16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 GPT2Q8TD30 523 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
TSPAN17-208ENST00000514705 ADCY5O95622 1261 aa16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 BICD2Q8TD16 824 aa16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
TSPAN17-208ENST00000514705 IFIT2P09913 472 aaKnown RBP16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 FOSBP53539 338 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 HSPA2P54652 639 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms