RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 DDX54Q8TDD1 881 aaKnown RBP22.33■■□□□ 1.17
RPS3A-212ENST00000514682 PKD1L3Q7Z443 1732 aa22.32■■□□□ 1.16
RPS3A-212ENST00000514682 MTHFSP49914 203 aa22.32■■□□□ 1.16
RPS3A-212ENST00000514682 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
RPS3A-212ENST00000514682 PARD3Q8TEW0 1356 aa22.32■■□□□ 1.16
RPS3A-212ENST00000514682 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
RPS3A-212ENST00000514682 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
RPS3A-212ENST00000514682 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
RPS3A-212ENST00000514682 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
RPS3A-212ENST00000514682 RGPD3A6NKT7 1758 aaPredicted RBP22.29■■□□□ 1.16
RPS3A-212ENST00000514682 RGPD4Q7Z3J3 1758 aa22.29■■□□□ 1.16
RPS3A-212ENST00000514682 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
RPS3A-212ENST00000514682 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
RPS3A-212ENST00000514682 DOT1LQ8TEK3 1739 aa22.28■■□□□ 1.16
RPS3A-212ENST00000514682 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
RPS3A-212ENST00000514682 RREB1Q92766 1687 aa22.27■■□□□ 1.16
RPS3A-212ENST00000514682 IL13P35225 146 aa22.27■■□□□ 1.16
RPS3A-212ENST00000514682 EZH2Q15910 746 aaKnown RBP22.27■■□□□ 1.16
RPS3A-212ENST00000514682 CAMKK2Q96RR4 588 aa22.27■■□□□ 1.16
RPS3A-212ENST00000514682 KCNQ2O43526 872 aa22.25■■□□□ 1.15
RPS3A-212ENST00000514682 AEBP1Q8IUX7 1158 aa22.24■■□□□ 1.15
RPS3A-212ENST00000514682 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
RPS3A-212ENST00000514682 KDRP35968 1356 aa22.24■■□□□ 1.15
RPS3A-212ENST00000514682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.23■■□□□ 1.156e-12■□□□□ 9.5
RPS3A-212ENST00000514682 NUP188Q5SRE5 1749 aa22.23■■□□□ 1.15
RPS3A-212ENST00000514682 BTAF1O14981 1849 aa22.22■■□□□ 1.15
RPS3A-212ENST00000514682 CYP27B1O15528 508 aa22.22■■□□□ 1.15
RPS3A-212ENST00000514682 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
RPS3A-212ENST00000514682 DDX10Q13206 875 aaKnown RBP22.22■■□□□ 1.15
RPS3A-212ENST00000514682 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
RPS3A-212ENST00000514682 SULT6B1Q6IMI4 303 aa22.21■■□□□ 1.15
RPS3A-212ENST00000514682 PLSCR1O15162 318 aa22.2■■□□□ 1.14
RPS3A-212ENST00000514682 SYTL4Q96C24 671 aaPredicted RBP22.19■■□□□ 1.14
RPS3A-212ENST00000514682 CFAP53Q96M91 514 aa22.19■■□□□ 1.14
RPS3A-212ENST00000514682 TOGARAM1Q9Y4F4 1720 aa22.19■■□□□ 1.14
RPS3A-212ENST00000514682 PRIM1P49642 420 aaKnown RBP22.18■■□□□ 1.14
RPS3A-212ENST00000514682 PLEKHO1Q53GL0 409 aaPredicted RBP22.16■■□□□ 1.14
RPS3A-212ENST00000514682 HMOX1P09601 288 aa22.15■■□□□ 1.14
RPS3A-212ENST00000514682 PHKG2P15735 406 aa22.15■■□□□ 1.14
RPS3A-212ENST00000514682 AMOTQ4VCS5 1084 aa22.15■■□□□ 1.14
RPS3A-212ENST00000514682 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
RPS3A-212ENST00000514682 NKX1-1Q15270 411 aaPredicted RBP22.14■■□□□ 1.13
RPS3A-212ENST00000514682 ZNF530Q6P9A1 599 aaPredicted RBP22.14■■□□□ 1.13
RPS3A-212ENST00000514682 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
RPS3A-212ENST00000514682 U2SURPO15042 1029 aaKnown RBP22.13■■□□□ 1.13
RPS3A-212ENST00000514682 TXNRD1Q16881 649 aa22.13■■□□□ 1.13
RPS3A-212ENST00000514682 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
RPS3A-212ENST00000514682 PROM2Q8N271 834 aa22.11■■□□□ 1.13
RPS3A-212ENST00000514682 R3HDM1Q15032 1099 aaKnown RBP22.1■■□□□ 1.13
RPS3A-212ENST00000514682 RALBP1Q15311 655 aa22.1■■□□□ 1.13
RPS3A-212ENST00000514682 NBPF14Q5TI25 921 aa22.1■■□□□ 1.13
RPS3A-212ENST00000514682 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
RPS3A-212ENST00000514682 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
RPS3A-212ENST00000514682 MPRIPQ6WCQ1 1025 aa22.09■■□□□ 1.13
RPS3A-212ENST00000514682 NUDCQ9Y266 331 aa22.09■■□□□ 1.13
RPS3A-212ENST00000514682 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
RPS3A-212ENST00000514682 ITGB4P16144 1822 aa22.08■■□□□ 1.13
RPS3A-212ENST00000514682 KDM6AO15550 1401 aaPredicted RBP22.08■■□□□ 1.13
RPS3A-212ENST00000514682 ANO8Q9HCE9 1232 aaPredicted RBP22.08■■□□□ 1.13
RPS3A-212ENST00000514682 LY75O60449 1722 aa22.07■■□□□ 1.12
RPS3A-212ENST00000514682 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
RPS3A-212ENST00000514682 DCAF5Q96JK2 942 aa22.06■■□□□ 1.12
RPS3A-212ENST00000514682 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
RPS3A-212ENST00000514682 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
RPS3A-212ENST00000514682 SLC27A3Q5K4L6 730 aa22.05■■□□□ 1.12
RPS3A-212ENST00000514682 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
RPS3A-212ENST00000514682 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
RPS3A-212ENST00000514682 PIGBQ92521 554 aa22.04■■□□□ 1.12
RPS3A-212ENST00000514682 MYBBP1AQ9BQG0 1328 aaKnown RBP22.04■■□□□ 1.12
RPS3A-212ENST00000514682 AKAP4Q5JQC9 854 aa22.03■■□□□ 1.12
RPS3A-212ENST00000514682 RSPH6AQ9H0K4 717 aa22.03■■□□□ 1.12
RPS3A-212ENST00000514682 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
RPS3A-212ENST00000514682 MTHFSDQ2M296 383 aaKnown RBP22.02■■□□□ 1.12
RPS3A-212ENST00000514682 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
RPS3A-212ENST00000514682 STK32BQ9NY57 414 aa22.02■■□□□ 1.12
RPS3A-212ENST00000514682 PRKAR2BP31323 418 aa22.01■■□□□ 1.11
RPS3A-212ENST00000514682 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
RPS3A-212ENST00000514682 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
RPS3A-212ENST00000514682 SRCAPQ6ZRS2 3230 aa22■■□□□ 1.11
RPS3A-212ENST00000514682 MRC1P22897 1456 aa21.99■■□□□ 1.11
RPS3A-212ENST00000514682 GAS2L2Q8NHY3 880 aa21.99■■□□□ 1.11
RPS3A-212ENST00000514682 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
RPS3A-212ENST00000514682 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 KCNQ4P56696 695 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 CABP4P57796 275 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 SLC15A2Q16348 729 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
RPS3A-212ENST00000514682 LRP5O75197 1615 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 MAP3K5Q99683 1374 aa21.98■■□□□ 1.11
RPS3A-212ENST00000514682 ZNF827Q17R98 1081 aa21.97■■□□□ 1.11
RPS3A-212ENST00000514682 C5P01031 1676 aa21.97■■□□□ 1.11
RPS3A-212ENST00000514682 CASZ1Q86V15 1759 aa21.97■■□□□ 1.11
RPS3A-212ENST00000514682 FCHSD2O94868 740 aa21.96■■□□□ 1.11
RPS3A-212ENST00000514682 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
RPS3A-212ENST00000514682 PHACTR3Q96KR7 559 aa21.95■■□□□ 1.1
RPS3A-212ENST00000514682 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
RPS3A-212ENST00000514682 RNMTO43148 476 aaKnown RBP21.94■■□□□ 1.1
RPS3A-212ENST00000514682 AKT1S1Q96B36 256 aa21.93■■□□□ 1.1
RPS3A-212ENST00000514682 LOC102724428A0A0B4J2F2 783 aa21.92■■□□□ 1.1
RPS3A-212ENST00000514682 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms