RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
ATP2C1-222ENST00000514654 HIP1O00291 1037 aa7.4□□□□□ -1.23
ATP2C1-222ENST00000514654 CCDC8Q9H0W5 538 aaPredicted RBP7.4□□□□□ -1.23
ATP2C1-222ENST00000514654 BOLA2Q9H3K6 86 aa7.4□□□□□ -1.23
ATP2C1-222ENST00000514654 PER1O15534 1290 aaPredicted RBP7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 MX1P20591 662 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 AMOTQ4VCS5 1084 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 SASS6Q6UVJ0 657 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 DNAAF4Q8WXU2 420 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 SDF4Q9BRK5 362 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 KIF21AQ7Z4S6 1674 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ZNF518AQ6AHZ1 1483 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ANKRD24Q8TF21 1146 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 JAKMIP1Q96N16 626 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 TMOD3Q9NYL9 352 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 CTTNBP2Q8WZ74 1663 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 KRT24Q2M2I5 525 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 C8orf58Q8NAV2 365 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ZBTB3Q9H5J0 574 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 EIF4G3O43432 1585 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 UHRF1BP1LA0JNW5 1464 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ANKRD36BQ8N2N9 1353 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PI4KAP2A4QPH2 592 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PI4KAP1Q8N8J0 262 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 CABLES1Q8TDN4 633 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PHF23Q9BUL5 403 aaPredicted RBP7.39□□□□□ -1.23
ATP2C1-222ENST00000514654 PZPP20742 1482 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 RIMS2Q9UQ26 1411 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 MCM2P49736 904 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 EIF4A2Q14240 407 aaKnown RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 MPNDQ8N594 471 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 KIF1BPQ96EK5 621 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 NSD2O96028 1365 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 PARD3Q8TEW0 1356 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 BCL11BQ9C0K0 894 aaPredicted RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 NUP160Q12769 1436 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 IDH1O75874 414 aaKnown RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 STARD3NLO95772 234 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 CCAR2Q8N163 923 aaKnown RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 LRRC59Q96AG4 307 aaKnown RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 DBF4Q9UBU7 674 aaPredicted RBP7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 BRPF3Q9ULD4 1205 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 PPIP5K1Q6PFW1 1433 aa7.38□□□□□ -1.23
ATP2C1-222ENST00000514654 GPTP24298 496 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 SLC39A6Q13433 755 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 BLOC1S2Q6QNY1 142 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 LARP6Q9BRS8 491 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 PPP1R1BQ9UD71 204 aaPredicted RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 A0A087WZG4 1122 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 PIP4K2AP48426 406 aaPredicted RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 NASPP49321 788 aaPredicted RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 HSPA2P54652 639 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 TSPYL6Q8N831 410 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 TPM3P06753 285 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 SART3Q15020 963 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 MEIS3Q99687 375 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 MAP3K2Q9Y2U5 619 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 KCNA6P17658 529 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 METTL24Q5JXM2 366 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.37□□□□□ -1.239e-8■■■□□ 17.1
ATP2C1-222ENST00000514654 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 CTDP1Q9Y5B0 961 aaPredicted RBP7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 PLEKHH1Q9ULM0 1364 aa7.37□□□□□ -1.23
ATP2C1-222ENST00000514654 PDCP20941 246 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 PCMTD1Q96MG8 357 aaPredicted RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 ASXL1Q8IXJ9 1541 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 RLBP1P12271 317 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 CASTP20810 708 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 ITSN2Q9NZM3 1697 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 ABCC10Q5T3U5 1492 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 PPP1R42Q7Z4L9 355 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 DDX11Q96FC9 970 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 GLRX3O76003 335 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 MRE11P49959 708 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 MTHFSDQ2M296 383 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 TSR1Q2NL82 804 aaKnown RBP7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 FERMT3Q86UX7 667 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 NUP133Q8WUM0 1156 aa7.36□□□□□ -1.23
ATP2C1-222ENST00000514654 CADPS2Q86UW7 1296 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 IFNL2Q8IZJ0 200 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 LRP2BPQ9P2M1 347 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 A0A1W2PP64 1363 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 MCM4P33991 863 aa7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 NOC3LQ8WTT2 800 aaKnown RBP7.35□□□□□ -1.23
ATP2C1-222ENST00000514654 CHPF2Q9P2E5 772 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms