RNA–Protein interactions for RNA: ENST00000514482.1

FRG1-204, Transcript of FSHD region gene 1, humanhuman

TSL 3

Gene FRG1, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-204ENST00000514482 HOXC9P31274 260 aa9.16□□□□□ -0.94
FRG1-204ENST00000514482 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
FRG1-204ENST00000514482 PHRF1Q9P1Y6 1649 aaKnown RBP9.16□□□□□ -0.94
FRG1-204ENST00000514482 MST1RQ04912 1400 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 NPHP3Q7Z494 1330 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 FANCIQ9NVI1 1328 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 PLIN1O60240 522 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 MS4A1P11836 297 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 GNAI1P63096 354 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 LMOD2Q6P5Q4 547 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 EXOC6Q8TAG9 804 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
FRG1-204ENST00000514482 ALS2Q96Q42 1657 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 PDE3AQ14432 1141 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
FRG1-204ENST00000514482 IP6K1Q92551 441 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 ZNF428Q96B54 188 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 CRBNQ96SW2 442 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 LAS1LQ9Y4W2 734 aaKnown RBP9.14□□□□□ -0.95
FRG1-204ENST00000514482 SLIT3O75094 1523 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 NFAT5O94916 1531 aa9.14□□□□□ -0.95
FRG1-204ENST00000514482 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
FRG1-204ENST00000514482 BCAR3O75815 825 aa9.13□□□□□ -0.95
FRG1-204ENST00000514482 RARSP54136 660 aaKnown RBP9.13□□□□□ -0.95
FRG1-204ENST00000514482 HAP1P54257 671 aaPredicted RBP9.13□□□□□ -0.95
FRG1-204ENST00000514482 EVX2Q03828 476 aa9.13□□□□□ -0.95
FRG1-204ENST00000514482 AAMPQ13685 434 aa9.13□□□□□ -0.95
FRG1-204ENST00000514482 EYA1Q99502 592 aa9.13□□□□□ -0.95
FRG1-204ENST00000514482 KDRP35968 1356 aa9.12□□□□□ -0.95
FRG1-204ENST00000514482 ZBTB7CA1YPR0 619 aa9.12□□□□□ -0.95
FRG1-204ENST00000514482 GCP02774 474 aa9.12□□□□□ -0.95
FRG1-204ENST00000514482 XPCQ01831 940 aaPredicted RBP9.12□□□□□ -0.95
FRG1-204ENST00000514482 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
FRG1-204ENST00000514482 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
FRG1-204ENST00000514482 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
FRG1-204ENST00000514482 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
FRG1-204ENST00000514482 USP19O94966 1318 aa9.11□□□□□ -0.95
FRG1-204ENST00000514482 IPO8O15397 1037 aaKnown RBP9.11□□□□□ -0.95
FRG1-204ENST00000514482 HTATSF1O43719 755 aaKnown RBP9.11□□□□□ -0.95
FRG1-204ENST00000514482 CD44P16070 742 aaKnown RBP9.11□□□□□ -0.95
FRG1-204ENST00000514482 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
FRG1-204ENST00000514482 FRAT1Q92837 279 aaPredicted RBP9.11□□□□□ -0.95
FRG1-204ENST00000514482 LTV1Q96GA3 475 aaPredicted RBP9.11□□□□□ -0.95
FRG1-204ENST00000514482 SMC4Q9NTJ3 1288 aa9.11□□□□□ -0.95
FRG1-204ENST00000514482 RGPD2P0DJD1 1756 aa9.11□□□□□ -0.95
FRG1-204ENST00000514482 RGPD5Q99666 1765 aa9.11□□□□□ -0.95
FRG1-204ENST00000514482 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
FRG1-204ENST00000514482 ZKSCAN2Q63HK3 967 aa9.1□□□□□ -0.95
FRG1-204ENST00000514482 ARHGEF25Q86VW2 580 aa9.1□□□□□ -0.95
FRG1-204ENST00000514482 TNS3Q68CZ2 1445 aa9.1□□□□□ -0.95
FRG1-204ENST00000514482 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
FRG1-204ENST00000514482 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
FRG1-204ENST00000514482 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
FRG1-204ENST00000514482 ZNF335Q9H4Z2 1342 aaPredicted RBP9.09□□□□□ -0.95
FRG1-204ENST00000514482 RIOK3O14730 519 aaKnown RBP9.09□□□□□ -0.95
FRG1-204ENST00000514482 ZNF853P0CG23 659 aa9.09□□□□□ -0.95
FRG1-204ENST00000514482 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
FRG1-204ENST00000514482 FTSJ3Q8IY81 847 aaKnown RBP9.09□□□□□ -0.95
FRG1-204ENST00000514482 KIF12Q96FN5 646 aa9.09□□□□□ -0.95
FRG1-204ENST00000514482 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
FRG1-204ENST00000514482 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
FRG1-204ENST00000514482 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
FRG1-204ENST00000514482 THUMPD2Q9BTF0 503 aaKnown RBP9.08□□□□□ -0.96
FRG1-204ENST00000514482 CHMP4BQ9H444 224 aaKnown RBP9.08□□□□□ -0.96
FRG1-204ENST00000514482 MBIPQ9NS73 344 aa9.08□□□□□ -0.96
FRG1-204ENST00000514482 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
FRG1-204ENST00000514482 ABCC6O95255 1503 aa9.08□□□□□ -0.96
FRG1-204ENST00000514482 FAM83GA6ND36 823 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 TWISTNBQ3B726 338 aaPredicted RBP9.07□□□□□ -0.96
FRG1-204ENST00000514482 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 PLEKHO1Q53GL0 409 aaPredicted RBP9.07□□□□□ -0.96
FRG1-204ENST00000514482 BRINP3Q76B58 766 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 CENPQQ7L2Z9 268 aaPredicted RBP9.07□□□□□ -0.96
FRG1-204ENST00000514482 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
FRG1-204ENST00000514482 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 BCL2L13Q9BXK5 485 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 PXDNQ92626 1479 aa9.07□□□□□ -0.96
FRG1-204ENST00000514482 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 MAP3K13O43283 966 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
FRG1-204ENST00000514482 DCTN1Q14203 1278 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 ATF7IPQ6VMQ6 1270 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 MCM10Q7L590 875 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 SSH1Q8WYL5 1049 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 PCDHB8Q9UN66 801 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 MED1Q15648 1581 aaPredicted RBP9.06□□□□□ -0.96
FRG1-204ENST00000514482 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
FRG1-204ENST00000514482 CRYBG1Q9Y4K1 1723 aa9.05□□□□□ -0.96
FRG1-204ENST00000514482 LMO7Q8WWI1 1683 aa9.05□□□□□ -0.96
FRG1-204ENST00000514482 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
FRG1-204ENST00000514482 CHL1O00533 1208 aa9.05□□□□□ -0.96
FRG1-204ENST00000514482 VAMP4O75379 141 aa9.05□□□□□ -0.96
FRG1-204ENST00000514482 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
FRG1-204ENST00000514482 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms