RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
NFKB1-211ENST00000513803 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
NFKB1-211ENST00000513803 IGSF1Q8N6C5 1336 aa15.59■□□□□ 0.09
NFKB1-211ENST00000513803 USP47Q96K76 1375 aa15.59■□□□□ 0.09
NFKB1-211ENST00000513803 CAPN15O75808 1086 aa15.58■□□□□ 0.08
NFKB1-211ENST00000513803 COL13A1Q5TAT6 717 aaPredicted RBP15.58■□□□□ 0.08
NFKB1-211ENST00000513803 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
NFKB1-211ENST00000513803 NME9Q86XW9 330 aa15.57■□□□□ 0.08
NFKB1-211ENST00000513803 IP6K1Q92551 441 aa15.57■□□□□ 0.08
NFKB1-211ENST00000513803 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
NFKB1-211ENST00000513803 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
NFKB1-211ENST00000513803 WWC3Q9ULE0 1092 aa15.56■□□□□ 0.08
NFKB1-211ENST00000513803 NSD2O96028 1365 aa15.55■□□□□ 0.08
NFKB1-211ENST00000513803 PRELPP51888 382 aa15.55■□□□□ 0.08
NFKB1-211ENST00000513803 TNS4Q8IZW8 715 aa15.55■□□□□ 0.08
NFKB1-211ENST00000513803 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
NFKB1-211ENST00000513803 LY75O60449 1722 aa15.54■□□□□ 0.08
NFKB1-211ENST00000513803 JMYQ8N9B5 988 aa15.53■□□□□ 0.08
NFKB1-211ENST00000513803 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
NFKB1-211ENST00000513803 HDGFL2Q7Z4V5 671 aaPredicted RBP15.51■□□□□ 0.07
NFKB1-211ENST00000513803 C16orf71Q8IYS4 520 aaPredicted RBP15.51■□□□□ 0.07
NFKB1-211ENST00000513803 AK7Q96M32 723 aa15.51■□□□□ 0.07
NFKB1-211ENST00000513803 TMC1Q8TDI8 760 aa15.5■□□□□ 0.07
NFKB1-211ENST00000513803 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
NFKB1-211ENST00000513803 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
NFKB1-211ENST00000513803 NMRK2Q9NPI5 230 aa15.49■□□□□ 0.07
NFKB1-211ENST00000513803 LTN1O94822 1766 aa15.49■□□□□ 0.07
NFKB1-211ENST00000513803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.48■□□□□ 0.07
NFKB1-211ENST00000513803 AMPHP49418 695 aa15.48■□□□□ 0.07
NFKB1-211ENST00000513803 FSTL1Q12841 308 aa15.48■□□□□ 0.07
NFKB1-211ENST00000513803 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
NFKB1-211ENST00000513803 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
NFKB1-211ENST00000513803 PHF14O94880 888 aa15.47■□□□□ 0.07
NFKB1-211ENST00000513803 MPRIPQ6WCQ1 1025 aa15.47■□□□□ 0.07
NFKB1-211ENST00000513803 ARHGAP27Q6ZUM4 889 aa15.47■□□□□ 0.07
NFKB1-211ENST00000513803 RAPGEF4Q8WZA2 1011 aa15.47■□□□□ 0.07
NFKB1-211ENST00000513803 PALLDQ8WX93 1383 aa15.47■□□□□ 0.07
NFKB1-211ENST00000513803 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 PCNTO95613 3336 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 SSFA2P28290 1259 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 TGFB2P61812 414 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 HTRA3P83110 453 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 BCS1LQ9Y276 419 aa15.46■□□□□ 0.07
NFKB1-211ENST00000513803 HOXC9P31274 260 aa15.45■□□□□ 0.06
NFKB1-211ENST00000513803 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
NFKB1-211ENST00000513803 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
NFKB1-211ENST00000513803 EDC4Q6P2E9 1401 aaKnown RBP15.44■□□□□ 0.06
NFKB1-211ENST00000513803 AMIGO3Q86WK7 504 aa15.44■□□□□ 0.06
NFKB1-211ENST00000513803 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
NFKB1-211ENST00000513803 ROCK2O75116 1388 aaKnown RBP15.44■□□□□ 0.06
NFKB1-211ENST00000513803 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
NFKB1-211ENST00000513803 NBPF6Q5VWK0 638 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 COG3Q96JB2 828 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 NBPF4Q96M43 638 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 MEGF6O75095 1541 aa15.43■□□□□ 0.06
NFKB1-211ENST00000513803 C5P01031 1676 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 FAM208AQ9UK61 1670 aaKnown RBP15.42■□□□□ 0.06
NFKB1-211ENST00000513803 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 A0A0G2JLW4 131 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 MMP10P09238 476 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 KDM2BQ8NHM5 1336 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
NFKB1-211ENST00000513803 WDR90Q96KV7 1748 aa15.41■□□□□ 0.06
NFKB1-211ENST00000513803 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
NFKB1-211ENST00000513803 CICQ96RK0 1608 aaPredicted RBP15.41■□□□□ 0.06
NFKB1-211ENST00000513803 FCHSD2O94868 740 aa15.4■□□□□ 0.06
NFKB1-211ENST00000513803 C9orf131Q5VYM1 1079 aa15.4■□□□□ 0.06
NFKB1-211ENST00000513803 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
NFKB1-211ENST00000513803 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 GNPATO15228 680 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 SIK1P57059 783 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 USHBP1Q8N6Y0 703 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 RRAGCQ9HB90 399 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 PXDNLA1KZ92 1463 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
NFKB1-211ENST00000513803 DPEP1P16444 411 aa15.37■□□□□ 0.05
NFKB1-211ENST00000513803 FBLN1P23142 703 aa15.37■□□□□ 0.05
NFKB1-211ENST00000513803 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
NFKB1-211ENST00000513803 PIGBQ92521 554 aa15.37■□□□□ 0.05
NFKB1-211ENST00000513803 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
NFKB1-211ENST00000513803 A0A1W2PP64 1363 aa15.36■□□□□ 0.05
NFKB1-211ENST00000513803 CYP27B1O15528 508 aa15.36■□□□□ 0.05
NFKB1-211ENST00000513803 HSPA1AP0DMV8 641 aaKnown RBP15.36■□□□□ 0.05
NFKB1-211ENST00000513803 HSPA1BP0DMV9 641 aaKnown RBP15.36■□□□□ 0.05
NFKB1-211ENST00000513803 TMF1P82094 1093 aa15.36■□□□□ 0.05
NFKB1-211ENST00000513803 CCDC87Q9NVE4 849 aa15.36■□□□□ 0.05
NFKB1-211ENST00000513803 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
NFKB1-211ENST00000513803 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
NFKB1-211ENST00000513803 RTL1A6NKG5 1358 aa15.35■□□□□ 0.05
NFKB1-211ENST00000513803 UBR3Q6ZT12 1888 aa15.34■□□□□ 0.05
NFKB1-211ENST00000513803 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
NFKB1-211ENST00000513803 PIM2Q9P1W9 311 aa15.34■□□□□ 0.05
NFKB1-211ENST00000513803 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms