RNA–Protein interactions for RNA: ENST00000513590.5

PACRGL-228, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-228ENST00000513590 FLAD1Q8NFF5 587 aa22.25■■□□□ 1.15
PACRGL-228ENST00000513590 HMGB2P26583 209 aaKnown RBP22.24■■□□□ 1.15
PACRGL-228ENST00000513590 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
PACRGL-228ENST00000513590 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
PACRGL-228ENST00000513590 PRELPP51888 382 aa22.21■■□□□ 1.15
PACRGL-228ENST00000513590 TNS4Q8IZW8 715 aa22.21■■□□□ 1.15
PACRGL-228ENST00000513590 USP31Q70CQ4 1352 aa22.21■■□□□ 1.15
PACRGL-228ENST00000513590 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
PACRGL-228ENST00000513590 USP47Q96K76 1375 aa22.2■■□□□ 1.14
PACRGL-228ENST00000513590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
PACRGL-228ENST00000513590 NSD2O96028 1365 aa22.19■■□□□ 1.14
PACRGL-228ENST00000513590 LY75O60449 1722 aa22.19■■□□□ 1.14
PACRGL-228ENST00000513590 KLRG1Q96E93 195 aa22.18■■□□□ 1.14
PACRGL-228ENST00000513590 JMYQ8N9B5 988 aa22.17■■□□□ 1.14
PACRGL-228ENST00000513590 NME9Q86XW9 330 aa22.14■■□□□ 1.13
PACRGL-228ENST00000513590 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
PACRGL-228ENST00000513590 RBM46Q8TBY0 533 aaKnown RBP22.13■■□□□ 1.13
PACRGL-228ENST00000513590 IP6K1Q92551 441 aa22.12■■□□□ 1.13
PACRGL-228ENST00000513590 LTV1Q96GA3 475 aaPredicted RBP22.12■■□□□ 1.13
PACRGL-228ENST00000513590 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
PACRGL-228ENST00000513590 DOT1LQ8TEK3 1739 aa22.11■■□□□ 1.13
PACRGL-228ENST00000513590 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
PACRGL-228ENST00000513590 NMRK2Q9NPI5 230 aa22.1■■□□□ 1.13
PACRGL-228ENST00000513590 LTN1O94822 1766 aa22.09■■□□□ 1.13
PACRGL-228ENST00000513590 HTRA3P83110 453 aa22.08■■□□□ 1.13
PACRGL-228ENST00000513590 AK7Q96M32 723 aa22.08■■□□□ 1.13
PACRGL-228ENST00000513590 WDR90Q96KV7 1748 aa22.08■■□□□ 1.12
PACRGL-228ENST00000513590 FSTL1Q12841 308 aa22.07■■□□□ 1.12
PACRGL-228ENST00000513590 CICQ96RK0 1608 aaPredicted RBP22.06■■□□□ 1.12
PACRGL-228ENST00000513590 USP54Q70EL1 1684 aa22.06■■□□□ 1.12
PACRGL-228ENST00000513590 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
PACRGL-228ENST00000513590 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
PACRGL-228ENST00000513590 PHF14O94880 888 aa22.04■■□□□ 1.12
PACRGL-228ENST00000513590 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
PACRGL-228ENST00000513590 C5P01031 1676 aa22.04■■□□□ 1.12
PACRGL-228ENST00000513590 MON2Q7Z3U7 1717 aa22.03■■□□□ 1.12
PACRGL-228ENST00000513590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
PACRGL-228ENST00000513590 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
PACRGL-228ENST00000513590 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
PACRGL-228ENST00000513590 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
PACRGL-228ENST00000513590 BCS1LQ9Y276 419 aa22.02■■□□□ 1.12
PACRGL-228ENST00000513590 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
PACRGL-228ENST00000513590 CGNL1Q0VF96 1302 aa22.01■■□□□ 1.11
PACRGL-228ENST00000513590 SSFA2P28290 1259 aa22■■□□□ 1.11
PACRGL-228ENST00000513590 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
PACRGL-228ENST00000513590 MEGF6O75095 1541 aa22■■□□□ 1.11
PACRGL-228ENST00000513590 TGFB2P61812 414 aa21.99■■□□□ 1.11
PACRGL-228ENST00000513590 MPRIPQ6WCQ1 1025 aa21.99■■□□□ 1.11
PACRGL-228ENST00000513590 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
PACRGL-228ENST00000513590 AMPHP49418 695 aa21.98■■□□□ 1.11
PACRGL-228ENST00000513590 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
PACRGL-228ENST00000513590 HOXC9P31274 260 aa21.97■■□□□ 1.11
PACRGL-228ENST00000513590 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
PACRGL-228ENST00000513590 PLEKHG2Q9H7P9 1386 aa21.97■■□□□ 1.11
PACRGL-228ENST00000513590 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
PACRGL-228ENST00000513590 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
PACRGL-228ENST00000513590 C4BP0C0L5 1744 aa21.96■■□□□ 1.11
PACRGL-228ENST00000513590 KDM2BQ8NHM5 1336 aa21.96■■□□□ 1.11
PACRGL-228ENST00000513590 CD163L1Q9NR16 1453 aa21.96■■□□□ 1.11
PACRGL-228ENST00000513590 TAF1LQ8IZX4 1826 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 A0A0G2JLW4 131 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 MMP10P09238 476 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 C9orf131Q5VYM1 1079 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
PACRGL-228ENST00000513590 FCHSD2O94868 740 aa21.94■■□□□ 1.1
PACRGL-228ENST00000513590 SLC34A2O95436 690 aa21.94■■□□□ 1.1
PACRGL-228ENST00000513590 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
PACRGL-228ENST00000513590 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
PACRGL-228ENST00000513590 TATP17735 454 aaPredicted RBP21.93■■□□□ 1.1
PACRGL-228ENST00000513590 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
PACRGL-228ENST00000513590 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
PACRGL-228ENST00000513590 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
PACRGL-228ENST00000513590 SLC12A5Q9H2X9 1139 aa21.93■■□□□ 1.1
PACRGL-228ENST00000513590 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
PACRGL-228ENST00000513590 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
PACRGL-228ENST00000513590 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
PACRGL-228ENST00000513590 COG3Q96JB2 828 aa21.91■■□□□ 1.1
PACRGL-228ENST00000513590 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
PACRGL-228ENST00000513590 UBR3Q6ZT12 1888 aa21.9■■□□□ 1.1
PACRGL-228ENST00000513590 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
PACRGL-228ENST00000513590 C10orf71Q711Q0 1435 aa21.89■■□□□ 1.1
PACRGL-228ENST00000513590 GNPATO15228 680 aa21.89■■□□□ 1.09
PACRGL-228ENST00000513590 DPEP1P16444 411 aa21.89■■□□□ 1.09
PACRGL-228ENST00000513590 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.09
PACRGL-228ENST00000513590 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.09
PACRGL-228ENST00000513590 NLGN1Q8N2Q7 840 aa21.88■■□□□ 1.09
PACRGL-228ENST00000513590 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
PACRGL-228ENST00000513590 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
PACRGL-228ENST00000513590 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
PACRGL-228ENST00000513590 SIK1P57059 783 aa21.87■■□□□ 1.09
PACRGL-228ENST00000513590 CCDC87Q9NVE4 849 aa21.87■■□□□ 1.09
PACRGL-228ENST00000513590 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
PACRGL-228ENST00000513590 PIGBQ92521 554 aa21.86■■□□□ 1.09
PACRGL-228ENST00000513590 RTL1A6NKG5 1358 aa21.86■■□□□ 1.09
PACRGL-228ENST00000513590 CYP27B1O15528 508 aa21.85■■□□□ 1.09
PACRGL-228ENST00000513590 FBLN1P23142 703 aa21.85■■□□□ 1.09
PACRGL-228ENST00000513590 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
PACRGL-228ENST00000513590 SMG6Q86US8 1419 aaKnown RBP21.85■■□□□ 1.09
PACRGL-228ENST00000513590 TMF1P82094 1093 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms