RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
CDK7-208ENST00000512687 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
CDK7-208ENST00000512687 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
CDK7-208ENST00000512687 KCNQ2O43526 872 aa16.7■□□□□ 0.26
CDK7-208ENST00000512687 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
CDK7-208ENST00000512687 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
CDK7-208ENST00000512687 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
CDK7-208ENST00000512687 PLSCR1O15162 318 aa16.69■□□□□ 0.26
CDK7-208ENST00000512687 LY75O60449 1722 aa16.69■□□□□ 0.26
CDK7-208ENST00000512687 ITGB4P16144 1822 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 INSRP06213 1382 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 FLT4P35916 1363 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 ACSBG1Q96GR2 724 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
CDK7-208ENST00000512687 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
CDK7-208ENST00000512687 PROM2Q8N271 834 aa16.67■□□□□ 0.26
CDK7-208ENST00000512687 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
CDK7-208ENST00000512687 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
CDK7-208ENST00000512687 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
CDK7-208ENST00000512687 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
CDK7-208ENST00000512687 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
CDK7-208ENST00000512687 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
CDK7-208ENST00000512687 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
CDK7-208ENST00000512687 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
CDK7-208ENST00000512687 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
CDK7-208ENST00000512687 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
CDK7-208ENST00000512687 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
CDK7-208ENST00000512687 TXNRD1Q16881 649 aa16.62■□□□□ 0.25
CDK7-208ENST00000512687 NSD2O96028 1365 aa16.62■□□□□ 0.25
CDK7-208ENST00000512687 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
CDK7-208ENST00000512687 PANK3Q9H999 370 aa16.61■□□□□ 0.25
CDK7-208ENST00000512687 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
CDK7-208ENST00000512687 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
CDK7-208ENST00000512687 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
CDK7-208ENST00000512687 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
CDK7-208ENST00000512687 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
CDK7-208ENST00000512687 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
CDK7-208ENST00000512687 PPM1GO15355 546 aaPredicted RBP16.58■□□□□ 0.24
CDK7-208ENST00000512687 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
CDK7-208ENST00000512687 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.24
CDK7-208ENST00000512687 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
CDK7-208ENST00000512687 C5P01031 1676 aa16.58■□□□□ 0.24
CDK7-208ENST00000512687 VIRMAQ69YN4 1812 aaKnown RBP16.57■□□□□ 0.24
CDK7-208ENST00000512687 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
CDK7-208ENST00000512687 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
CDK7-208ENST00000512687 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
CDK7-208ENST00000512687 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
CDK7-208ENST00000512687 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
CDK7-208ENST00000512687 SLC15A2Q16348 729 aa16.54■□□□□ 0.24
CDK7-208ENST00000512687 EYA1Q99502 592 aa16.54■□□□□ 0.24
CDK7-208ENST00000512687 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
CDK7-208ENST00000512687 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
CDK7-208ENST00000512687 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
CDK7-208ENST00000512687 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
CDK7-208ENST00000512687 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
CDK7-208ENST00000512687 CYP27B1O15528 508 aa16.52■□□□□ 0.24
CDK7-208ENST00000512687 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
CDK7-208ENST00000512687 KCNQ4P56696 695 aa16.51■□□□□ 0.23
CDK7-208ENST00000512687 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
CDK7-208ENST00000512687 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
CDK7-208ENST00000512687 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
CDK7-208ENST00000512687 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
CDK7-208ENST00000512687 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
CDK7-208ENST00000512687 MORC1Q86VD1 984 aa16.48■□□□□ 0.23
CDK7-208ENST00000512687 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
CDK7-208ENST00000512687 KNSTRNQ9Y448 316 aa16.48■□□□□ 0.23
CDK7-208ENST00000512687 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
CDK7-208ENST00000512687 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
CDK7-208ENST00000512687 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
CDK7-208ENST00000512687 PTGER2P43116 358 aa16.46■□□□□ 0.23
CDK7-208ENST00000512687 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
CDK7-208ENST00000512687 PER1O15534 1290 aaPredicted RBP16.45■□□□□ 0.22
CDK7-208ENST00000512687 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
CDK7-208ENST00000512687 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
CDK7-208ENST00000512687 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
CDK7-208ENST00000512687 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
CDK7-208ENST00000512687 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
CDK7-208ENST00000512687 PALLDQ8WX93 1383 aa16.43■□□□□ 0.22
CDK7-208ENST00000512687 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
CDK7-208ENST00000512687 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
CDK7-208ENST00000512687 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
CDK7-208ENST00000512687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDK7-208ENST00000512687 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
CDK7-208ENST00000512687 PHKG2P15735 406 aa16.42■□□□□ 0.22
CDK7-208ENST00000512687 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
CDK7-208ENST00000512687 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
CDK7-208ENST00000512687 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
CDK7-208ENST00000512687 PIGBQ92521 554 aa16.41■□□□□ 0.22
CDK7-208ENST00000512687 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
CDK7-208ENST00000512687 IL13P35225 146 aa16.4■□□□□ 0.22
CDK7-208ENST00000512687 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
CDK7-208ENST00000512687 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
CDK7-208ENST00000512687 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
CDK7-208ENST00000512687 KDRP35968 1356 aa16.39■□□□□ 0.21
CDK7-208ENST00000512687 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
CDK7-208ENST00000512687 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
CDK7-208ENST00000512687 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
CDK7-208ENST00000512687 TJP1Q07157 1748 aa16.37■□□□□ 0.21
CDK7-208ENST00000512687 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms