RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 ZFYVE9O95405 1425 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 NPHP3Q7Z494 1330 aa15.85■□□□□ 0.13
PCDHA4-202ENST00000512229 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 CPLX1O14810 134 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 CCDC34Q96HJ3 373 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
PCDHA4-202ENST00000512229 MCM2P49736 904 aa15.83■□□□□ 0.13
PCDHA4-202ENST00000512229 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 LTKP29376 864 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 PSMA5P28066 241 aa15.83■□□□□ 0.12
PCDHA4-202ENST00000512229 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 MSH6P52701 1360 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 CCDC57Q2TAC2 916 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 AACSQ86V21 672 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 EYA1Q99502 592 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 TRPM2O94759 1503 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 VPS37CA5D8V6 355 aaPredicted RBP15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 STARD3NLO95772 234 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 CDC42BPAQ5VT25 1732 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 RALYLQ86SE5 291 aaKnown RBP15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
PCDHA4-202ENST00000512229 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 GCP02774 474 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 AKAP17AQ02040 695 aaKnown RBP15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 TMOD3Q9NYL9 352 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 VAMP4O75379 141 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 LRRFIP2Q9Y608 721 aaKnown RBP15.81■□□□□ 0.12
PCDHA4-202ENST00000512229 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
PCDHA4-202ENST00000512229 HSPA2P54652 639 aa15.8■□□□□ 0.12
PCDHA4-202ENST00000512229 NOL10Q9BSC4 688 aaKnown RBP15.8■□□□□ 0.12
PCDHA4-202ENST00000512229 CEP126Q9P2H0 1117 aa15.8■□□□□ 0.12
PCDHA4-202ENST00000512229 CCDC158Q5M9N0 1113 aa15.8■□□□□ 0.12
PCDHA4-202ENST00000512229 PI4KAP2A4QPH2 592 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 KIAA2012Q0VF49 1180 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 PI4KAP1Q8N8J0 262 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 MAP4K4O95819 1239 aaPredicted RBP15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 TBC1D2BQ9UPU7 963 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 MAGI2Q86UL8 1455 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 MX1P20591 662 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 IL13P35225 146 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
PCDHA4-202ENST00000512229 HDAC1Q13547 482 aaPredicted RBP15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 NUTM1Q86Y26 1132 aa15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 RLBP1P12271 317 aa15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 MYD88Q99836 296 aa15.78■□□□□ 0.12
PCDHA4-202ENST00000512229 ANXA1P04083 346 aa15.77■□□□□ 0.12
PCDHA4-202ENST00000512229 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.12
PCDHA4-202ENST00000512229 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
PCDHA4-202ENST00000512229 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
PCDHA4-202ENST00000512229 INSRP06213 1382 aa15.77■□□□□ 0.12
PCDHA4-202ENST00000512229 GLRX3O76003 335 aaKnown RBP15.77■□□□□ 0.11
PCDHA4-202ENST00000512229 ARAP3Q8WWN8 1544 aa15.77■□□□□ 0.11
PCDHA4-202ENST00000512229 AKAP4Q5JQC9 854 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 HOXC9P31274 260 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 CHAF1AQ13111 956 aaPredicted RBP15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 IP6K1Q92551 441 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 MPHOSPH8Q99549 860 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 K7ELQ4 463 aaPredicted RBP15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 TRIM29Q14134 588 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 MEIS3Q99687 375 aa15.76■□□□□ 0.11
PCDHA4-202ENST00000512229 EXOC5O00471 708 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 KRT24Q2M2I5 525 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 TTC39AQ5SRH9 613 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 MYOM2P54296 1465 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
PCDHA4-202ENST00000512229 KDM5CP41229 1560 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 ERICH2A1L162 156 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 TPM4P67936 248 aa15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
PCDHA4-202ENST00000512229 ORAI2Q96SN7 254 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms