RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 TUBGCP6Q96RT7 1819 aa13.66□□□□□ -0.22
PTPN20-225ENST00000511769 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
PTPN20-225ENST00000511769 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
PTPN20-225ENST00000511769 TMF1P82094 1093 aa13.64□□□□□ -0.23
PTPN20-225ENST00000511769 ADGRB1O14514 1584 aa13.64□□□□□ -0.23
PTPN20-225ENST00000511769 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
PTPN20-225ENST00000511769 MLLT1Q03111 559 aaPredicted RBP13.64□□□□□ -0.23
PTPN20-225ENST00000511769 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
PTPN20-225ENST00000511769 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
PTPN20-225ENST00000511769 USP6P35125 1406 aa13.63□□□□□ -0.23
PTPN20-225ENST00000511769 BTAF1O14981 1849 aa13.63□□□□□ -0.23
PTPN20-225ENST00000511769 EXOC5O00471 708 aa13.63□□□□□ -0.23
PTPN20-225ENST00000511769 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
PTPN20-225ENST00000511769 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
PTPN20-225ENST00000511769 USP19O94966 1318 aa13.62□□□□□ -0.23
PTPN20-225ENST00000511769 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-225ENST00000511769 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
PTPN20-225ENST00000511769 TESK2Q96S53 571 aa13.62□□□□□ -0.23
PTPN20-225ENST00000511769 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
PTPN20-225ENST00000511769 CCDC7Q96M83 1385 aa13.61□□□□□ -0.23
PTPN20-225ENST00000511769 GCP02774 474 aa13.61□□□□□ -0.23
PTPN20-225ENST00000511769 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
PTPN20-225ENST00000511769 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
PTPN20-225ENST00000511769 KCNQ4P56696 695 aa13.6□□□□□ -0.23
PTPN20-225ENST00000511769 SLC27A3Q5K4L6 730 aa13.6□□□□□ -0.23
PTPN20-225ENST00000511769 WASLO00401 505 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-225ENST00000511769 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.23
PTPN20-225ENST00000511769 COL23A1Q86Y22 540 aaPredicted RBP13.58□□□□□ -0.24
PTPN20-225ENST00000511769 ITSN1Q15811 1721 aa13.57□□□□□ -0.24
PTPN20-225ENST00000511769 FOXN1O15353 648 aa13.57□□□□□ -0.24
PTPN20-225ENST00000511769 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
PTPN20-225ENST00000511769 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
PTPN20-225ENST00000511769 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
PTPN20-225ENST00000511769 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
PTPN20-225ENST00000511769 SMC1BQ8NDV3 1235 aa13.56□□□□□ -0.24
PTPN20-225ENST00000511769 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
PTPN20-225ENST00000511769 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
PTPN20-225ENST00000511769 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
PTPN20-225ENST00000511769 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
PTPN20-225ENST00000511769 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
PTPN20-225ENST00000511769 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
PTPN20-225ENST00000511769 ABCC6O95255 1503 aa13.53□□□□□ -0.24
PTPN20-225ENST00000511769 KCPQ6ZWJ8 1503 aa13.53□□□□□ -0.24
PTPN20-225ENST00000511769 RRAGCQ9HB90 399 aa13.53□□□□□ -0.24
PTPN20-225ENST00000511769 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
PTPN20-225ENST00000511769 ACEP12821 1306 aa13.53□□□□□ -0.24
PTPN20-225ENST00000511769 PUS7Q96PZ0 661 aaKnown RBP13.52□□□□□ -0.25
PTPN20-225ENST00000511769 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
PTPN20-225ENST00000511769 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
PTPN20-225ENST00000511769 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
PTPN20-225ENST00000511769 POLR3AO14802 1390 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-225ENST00000511769 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
PTPN20-225ENST00000511769 C10orf71Q711Q0 1435 aa13.51□□□□□ -0.25
PTPN20-225ENST00000511769 RGS19P49795 217 aa13.5□□□□□ -0.25
PTPN20-225ENST00000511769 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
PTPN20-225ENST00000511769 POLA2Q14181 598 aa13.5□□□□□ -0.25
PTPN20-225ENST00000511769 ARHGAP27Q6ZUM4 889 aa13.5□□□□□ -0.25
PTPN20-225ENST00000511769 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
PTPN20-225ENST00000511769 COL18A1P39060 1754 aa13.5□□□□□ -0.25
PTPN20-225ENST00000511769 ANP32CO43423 234 aa13.49□□□□□ -0.25
PTPN20-225ENST00000511769 CTCFP49711 727 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-225ENST00000511769 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
PTPN20-225ENST00000511769 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
PTPN20-225ENST00000511769 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
PTPN20-225ENST00000511769 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
PTPN20-225ENST00000511769 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
PTPN20-225ENST00000511769 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
PTPN20-225ENST00000511769 TMC1Q8TDI8 760 aa13.47□□□□□ -0.25
PTPN20-225ENST00000511769 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-225ENST00000511769 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
PTPN20-225ENST00000511769 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.25
PTPN20-225ENST00000511769 PANK3Q9H999 370 aa13.46□□□□□ -0.25
PTPN20-225ENST00000511769 SLIT3O75094 1523 aa13.46□□□□□ -0.25
PTPN20-225ENST00000511769 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.26
PTPN20-225ENST00000511769 LBX1P52954 281 aa13.45□□□□□ -0.26
PTPN20-225ENST00000511769 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-225ENST00000511769 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
PTPN20-225ENST00000511769 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
PTPN20-225ENST00000511769 NLRP6P59044 892 aa13.44□□□□□ -0.26
PTPN20-225ENST00000511769 MIER1Q8N108 512 aa13.44□□□□□ -0.26
PTPN20-225ENST00000511769 LY75O60449 1722 aa13.44□□□□□ -0.26
PTPN20-225ENST00000511769 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
PTPN20-225ENST00000511769 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
PTPN20-225ENST00000511769 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
PTPN20-225ENST00000511769 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 IL2RBP14784 551 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 SLC12A5Q9H2X9 1139 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
PTPN20-225ENST00000511769 SOX12O15370 315 aa13.4□□□□□ -0.26
PTPN20-225ENST00000511769 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.26
PTPN20-225ENST00000511769 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
PTPN20-225ENST00000511769 FCHSD2O94868 740 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-225ENST00000511769 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-225ENST00000511769 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
PTPN20-225ENST00000511769 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms