RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 CCDC189A1A4V9 331 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 TNNT1P13805 278 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 FBXO38Q6PIJ6 1188 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 CCDC91Q7Z6B0 441 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 DEF6Q9H4E7 631 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 TPM3P06753 285 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 GSCP56915 257 aaPredicted RBP8.78□□□□□ -1
CPNE4-208ENST00000511604 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 SRLQ86TD4 932 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 CCDC191Q8NCU4 936 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 TSR2Q969E8 191 aaKnown RBP8.78□□□□□ -1
CPNE4-208ENST00000511604 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
CPNE4-208ENST00000511604 ANKRD36BQ8N2N9 1353 aa8.77□□□□□ -1
CPNE4-208ENST00000511604 ZNF853P0CG23 659 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 TTC31Q49AM3 519 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-208ENST00000511604 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 TRIM27P14373 513 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 ZSCAN26Q16670 478 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 TEX35Q5T0J7 233 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 ITPRIPQ8IWB1 547 aa8.77□□□□□ -1.01
CPNE4-208ENST00000511604 SYAP1Q96A49 352 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-208ENST00000511604 CWC15Q9P013 229 aaKnown RBP8.77□□□□□ -1.01
CPNE4-208ENST00000511604 CFDP1Q9UEE9 299 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-208ENST00000511604 BMS1Q14692 1282 aaKnown RBP8.76□□□□□ -1.01
CPNE4-208ENST00000511604 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
CPNE4-208ENST00000511604 FBXO41Q8TF61 875 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 GTF3C6Q969F1 213 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 C16orf45Q96MC5 204 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-208ENST00000511604 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 LRRFIP2Q9Y608 721 aaKnown RBP8.76□□□□□ -1.01
CPNE4-208ENST00000511604 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 TCP11L2Q8N4U5 519 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 HECW2Q9P2P5 1572 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
CPNE4-208ENST00000511604 ABCC10Q5T3U5 1492 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 KDM5DQ9BY66 1539 aa8.76□□□□□ -1.01
CPNE4-208ENST00000511604 PLXNC1O60486 1568 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 AP5Z1O43299 807 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 SMARCA5O60264 1052 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 E2F4Q16254 413 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 SWT1Q5T5J6 900 aaKnown RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 TMEM57Q8N5G2 664 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 CWC22Q9HCG8 908 aaKnown RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 PLEKHG2Q9H7P9 1386 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 PTPRCP08575 1304 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 KDM4AO75164 1064 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 CLSTN1O94985 981 aa8.75□□□□□ -1.01
CPNE4-208ENST00000511604 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 RTF1Q92541 710 aaKnown RBP8.75□□□□□ -1.01
CPNE4-208ENST00000511604 UHRF1BP1LA0JNW5 1464 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 NUCB1Q02818 461 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 HDAC1Q13547 482 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-208ENST00000511604 ZNF215Q9UL58 517 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-208ENST00000511604 FHOD1Q9Y613 1164 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 TRPM1Q7Z4N2 1603 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 PBRM1Q86U86 1689 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 ATP6V1AP38606 617 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 ELF2Q15723 593 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
CPNE4-208ENST00000511604 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.74□□□□□ -1.01
CPNE4-208ENST00000511604 V9GYY5 206 aaPredicted RBP8.74□□□□□ -1.01
CPNE4-208ENST00000511604 PRG4Q92954 1404 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 GPRASP1Q5JY77 1395 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 PPP1R12AO14974 1030 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 MAGEA9P43362 315 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 GPS2Q13227 327 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 ANKRD45Q5TZF3 282 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 CHD1LQ86WJ1 897 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 SUGP1Q8IWZ8 645 aaKnown RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 SMARCE1Q969G3 411 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 DTNBO60941 627 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 TPM4P67936 248 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 ST5P78524 1137 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 ZKSCAN2Q63HK3 967 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 FBXO18Q8NFZ0 1043 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 SSH1Q8WYL5 1049 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 RBM28Q9NW13 759 aaKnown RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 NOB1Q9ULX3 412 aaKnown RBP8.73□□□□□ -1.01
CPNE4-208ENST00000511604 A2MP01023 1474 aa8.73□□□□□ -1.01
CPNE4-208ENST00000511604 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 DIP2BQ9P265 1576 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 ABCA10Q8WWZ4 1543 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 MAP2K2P36507 400 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 PLCB2Q00722 1185 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 SPC24Q8NBT2 197 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 GOLGA5Q8TBA6 731 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 ERO1AQ96HE7 468 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 PIK3C2GO75747 1445 aa8.72□□□□□ -1.01
CPNE4-208ENST00000511604 HTATSF1O43719 755 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms