RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
BRIX1-203ENST00000510834 GAS2L2Q8NHY3 880 aa13.26□□□□□ -0.29
BRIX1-203ENST00000510834 MCM10Q7L590 875 aa13.25□□□□□ -0.29
BRIX1-203ENST00000510834 SLIT3O75094 1523 aa13.25□□□□□ -0.29
BRIX1-203ENST00000510834 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
BRIX1-203ENST00000510834 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
BRIX1-203ENST00000510834 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
BRIX1-203ENST00000510834 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
BRIX1-203ENST00000510834 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
BRIX1-203ENST00000510834 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
BRIX1-203ENST00000510834 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
BRIX1-203ENST00000510834 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
BRIX1-203ENST00000510834 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
BRIX1-203ENST00000510834 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
BRIX1-203ENST00000510834 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
BRIX1-203ENST00000510834 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
BRIX1-203ENST00000510834 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
BRIX1-203ENST00000510834 LMO7Q8WWI1 1683 aa13.22□□□□□ -0.29
BRIX1-203ENST00000510834 RGS12O14924 1447 aa13.22□□□□□ -0.29
BRIX1-203ENST00000510834 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
BRIX1-203ENST00000510834 FOXO3O43524 673 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 PSME1Q06323 249 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 STRCP1A6NGW2 1772 aa13.21□□□□□ -0.29
BRIX1-203ENST00000510834 MED1Q15648 1581 aaPredicted RBP13.2□□□□□ -0.3
BRIX1-203ENST00000510834 MSH6P52701 1360 aa13.2□□□□□ -0.3
BRIX1-203ENST00000510834 IP6K1Q92551 441 aa13.2□□□□□ -0.3
BRIX1-203ENST00000510834 PTPRCP08575 1304 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 MST1RQ04912 1400 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 DCCP43146 1447 aa13.19□□□□□ -0.3
BRIX1-203ENST00000510834 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
BRIX1-203ENST00000510834 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
BRIX1-203ENST00000510834 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
BRIX1-203ENST00000510834 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
BRIX1-203ENST00000510834 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
BRIX1-203ENST00000510834 NUCB1Q02818 461 aa13.17□□□□□ -0.3
BRIX1-203ENST00000510834 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
BRIX1-203ENST00000510834 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
BRIX1-203ENST00000510834 USP19O94966 1318 aa13.17□□□□□ -0.3
BRIX1-203ENST00000510834 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
BRIX1-203ENST00000510834 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
BRIX1-203ENST00000510834 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
BRIX1-203ENST00000510834 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
BRIX1-203ENST00000510834 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
BRIX1-203ENST00000510834 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
BRIX1-203ENST00000510834 C1orf115Q9H7X2 142 aa13.15□□□□□ -0.3
BRIX1-203ENST00000510834 ATP10DQ9P241 1426 aa13.15□□□□□ -0.3
BRIX1-203ENST00000510834 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
BRIX1-203ENST00000510834 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
BRIX1-203ENST00000510834 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
BRIX1-203ENST00000510834 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
BRIX1-203ENST00000510834 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
BRIX1-203ENST00000510834 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
BRIX1-203ENST00000510834 LMTK3Q96Q04 1460 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 SEC24BO95487 1268 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
BRIX1-203ENST00000510834 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
BRIX1-203ENST00000510834 GCP02774 474 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
BRIX1-203ENST00000510834 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
BRIX1-203ENST00000510834 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 TMEM94Q12767 1356 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
BRIX1-203ENST00000510834 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 ABCC6O95255 1503 aa13.12□□□□□ -0.31
BRIX1-203ENST00000510834 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
BRIX1-203ENST00000510834 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
BRIX1-203ENST00000510834 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
BRIX1-203ENST00000510834 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
BRIX1-203ENST00000510834 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
BRIX1-203ENST00000510834 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
BRIX1-203ENST00000510834 COL18A1P39060 1754 aa13.1□□□□□ -0.31
BRIX1-203ENST00000510834 PXDNQ92626 1479 aa13.1□□□□□ -0.31
BRIX1-203ENST00000510834 ANKRD44Q8N8A2 993 aa13.09□□□□□ -0.31
BRIX1-203ENST00000510834 ATF3P18847 181 aa13.09□□□□□ -0.31
BRIX1-203ENST00000510834 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
BRIX1-203ENST00000510834 ANKRD45Q5TZF3 282 aa13.09□□□□□ -0.31
BRIX1-203ENST00000510834 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
BRIX1-203ENST00000510834 NBR1Q14596 966 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 G2E3Q7L622 706 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
BRIX1-203ENST00000510834 LRRC59Q96AG4 307 aaKnown RBP13.08□□□□□ -0.32
BRIX1-203ENST00000510834 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
BRIX1-203ENST00000510834 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
BRIX1-203ENST00000510834 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms