RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PLSCR1O15162 318 aa15.97■□□□□ 0.15
HMGXB3-203ENST00000510472 KCNQ2O43526 872 aa15.97■□□□□ 0.15
HMGXB3-203ENST00000510472 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
HMGXB3-203ENST00000510472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGXB3-203ENST00000510472 CYP27B1O15528 508 aa15.95■□□□□ 0.14
HMGXB3-203ENST00000510472 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
HMGXB3-203ENST00000510472 PROM2Q8N271 834 aa15.94■□□□□ 0.14
HMGXB3-203ENST00000510472 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
HMGXB3-203ENST00000510472 PLEKHG2Q9H7P9 1386 aa15.93■□□□□ 0.14
HMGXB3-203ENST00000510472 NKX1-1Q15270 411 aaPredicted RBP15.93■□□□□ 0.14
HMGXB3-203ENST00000510472 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
HMGXB3-203ENST00000510472 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
HMGXB3-203ENST00000510472 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
HMGXB3-203ENST00000510472 KDRP35968 1356 aa15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 SPG7Q9UQ90 795 aa15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
HMGXB3-203ENST00000510472 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
HMGXB3-203ENST00000510472 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
HMGXB3-203ENST00000510472 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-203ENST00000510472 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-203ENST00000510472 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
HMGXB3-203ENST00000510472 SBF2Q86WG5 1849 aa15.88■□□□□ 0.13
HMGXB3-203ENST00000510472 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
HMGXB3-203ENST00000510472 PHKG2P15735 406 aa15.87■□□□□ 0.13
HMGXB3-203ENST00000510472 SRCAPQ6ZRS2 3230 aa15.87■□□□□ 0.13
HMGXB3-203ENST00000510472 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
HMGXB3-203ENST00000510472 TXNRD1Q16881 649 aa15.86■□□□□ 0.13
HMGXB3-203ENST00000510472 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
HMGXB3-203ENST00000510472 PLEKHO1Q53GL0 409 aaPredicted RBP15.86■□□□□ 0.13
HMGXB3-203ENST00000510472 IFNL2Q8IZJ0 200 aa15.86■□□□□ 0.13
HMGXB3-203ENST00000510472 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
HMGXB3-203ENST00000510472 PKD1L3Q7Z443 1732 aa15.83■□□□□ 0.13
HMGXB3-203ENST00000510472 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
HMGXB3-203ENST00000510472 HMOX1P09601 288 aa15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 RALBP1Q15311 655 aa15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 PIGBQ92521 554 aa15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 LRRC4BQ9NT99 713 aa15.82■□□□□ 0.12
HMGXB3-203ENST00000510472 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-203ENST00000510472 NBPF14Q5TI25 921 aa15.81■□□□□ 0.12
HMGXB3-203ENST00000510472 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-203ENST00000510472 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-203ENST00000510472 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 HSP90AB1P08238 724 aaKnown RBP15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
HMGXB3-203ENST00000510472 RREB1Q92766 1687 aa15.79■□□□□ 0.12
HMGXB3-203ENST00000510472 ERVV-2B6SEH9 535 aa15.79■□□□□ 0.12
HMGXB3-203ENST00000510472 U2SURPO15042 1029 aaKnown RBP15.79■□□□□ 0.12
HMGXB3-203ENST00000510472 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
HMGXB3-203ENST00000510472 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
HMGXB3-203ENST00000510472 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
HMGXB3-203ENST00000510472 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
HMGXB3-203ENST00000510472 AKAP4Q5JQC9 854 aa15.77■□□□□ 0.12
HMGXB3-203ENST00000510472 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
HMGXB3-203ENST00000510472 BTAF1O14981 1849 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 FCHSD2O94868 740 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 C1orf141Q5JVX7 400 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 NUP188Q5SRE5 1749 aa15.76■□□□□ 0.11
HMGXB3-203ENST00000510472 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 KCNQ4P56696 695 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 PHACTR3Q96KR7 559 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 ASAP1Q9ULH1 1129 aa15.75■□□□□ 0.11
HMGXB3-203ENST00000510472 U2AF1L5P0DN76 240 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 U2AF1Q01081 240 aaKnown RBP eCLIP15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 PRKRIP1Q9H875 184 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 LGR6Q9HBX8 967 aa15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
HMGXB3-203ENST00000510472 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
HMGXB3-203ENST00000510472 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
HMGXB3-203ENST00000510472 STK32BQ9NY57 414 aa15.73■□□□□ 0.11
HMGXB3-203ENST00000510472 CCNL1Q9UK58 526 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-203ENST00000510472 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
HMGXB3-203ENST00000510472 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
HMGXB3-203ENST00000510472 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
HMGXB3-203ENST00000510472 NFATC2IPQ8NCF5 419 aa15.72■□□□□ 0.11
HMGXB3-203ENST00000510472 PDGFDQ9GZP0 370 aaPredicted RBP15.72■□□□□ 0.11
HMGXB3-203ENST00000510472 CABP4P57796 275 aa15.71■□□□□ 0.11
HMGXB3-203ENST00000510472 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
HMGXB3-203ENST00000510472 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
HMGXB3-203ENST00000510472 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 SIK1P57059 783 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 SLC4A9Q96Q91 983 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 SLC52A2Q9HAB3 445 aa15.7■□□□□ 0.1
HMGXB3-203ENST00000510472 GNAT3A8MTJ3 354 aa15.68■□□□□ 0.1
HMGXB3-203ENST00000510472 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms